| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1173 |
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| Symbol | |
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| ID | 3933617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1136567 |
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| End bp | 1137805 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637903521 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_509115 |
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| Protein GI | 89053664 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.313794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACG GCGATATCCG GGTGAATACG TATGACGACG GCTCCACCGA TTTCCAGACC
GGCGAGCAGA AGATCCGCAA CTTCAACCTG AACTTCGGGC CGCAGCATCC GGCGGCCCAT
GGTGTGTTGC GGCTGGTGCT GGAGCTGGAC GGAGAGATCT GCGAGCGCTG TGATCCGCAT
ATCGGGCTGC TGCACCGGGG CACCGAAAAG CTCATGGAGA GCCGGACGTA TCTACAGAAC
CTGCCGTATT TCGACCGGCT GGATTATGTG GGCACGATGA ACCAGGAGCA TGCCTGGTGT
CTGGCGATCG AGCGGATGAC GGGCACGGAC GTGCCGCGCC GCGCGCAGCT GATCCGGGTC
TTGTATTGCG AGATTGGGCG GATCCTGAAC CACCTGCTGA ACGTCACGAC GCAGGCGCTG
GATGTGGGCG CGCTGACCCC GCCGCTTTGG GGGTTCGAGG AGCGTGAGAA GCTGATGATC
TTCTACGAGC GGGCCTCTGG CGCGCGTCTG CACGCGGCCT ATTTCCGGCC CGGCGGGGTG
CACCAAGACC TGCCGCCGGA GTTGATCGAA GATATCGACA CATGGGCCCA TGAATTCCCG
CAGATGCTGG ACGATATCGA TGGGCTGTTG AGCGAGAACC GCATCTTCAA GCAGCGCAAC
GTCGATATCG GCGTGGTCAC GGAAGAAGAT ATTCAGAACT GGGGCTTTTC CGGCGTGATG
GTGCGCGGAT CGGGCTTCGC CTGGGATCTG CGGCGCGCGC AACCCTATGA ATGCTATGAC
GAATTCGAGT TCCAGATCCC CGTGGGCAAG AATGGCGATT GCTATGACCG CTACCTCTGC
CGGATGGCGG AGATGCGCGA ATCGACGAAG ATCATCCATC AGGCCTGCGA GAAACTGCGC
AATGAGCCCG GTGAGATCAT GTCGCGCGGC AAGATGAGCC CGCCGTCGCG GGGGGACATG
AAGACGTCGA TGGAAGCGCT GATCCATCAC TTCAAGCTCT ACACTGAAGG CTTCCACGTG
CCCGAGGGTG AGATCTACGC CTGCGTCGAG GCGCCCAAGG GCGAGTTCGG CGTGTTCCTT
GTGGCCGACG GCACCAACAA GCCCTACCGC GCGAAACTGC GCGCGCCGGG CTTCGCGCAT
CTGCAGGCGA TGGATTACCT GTGCAAAGGG CACCAACTGG CGGATGTGTC GGCGGTGCTG
GGGTCTTTGG ACATCGTTTT CGGGGAAGTG GACCGCTAA
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| Protein sequence | MMDGDIRVNT YDDGSTDFQT GEQKIRNFNL NFGPQHPAAH GVLRLVLELD GEICERCDPH
IGLLHRGTEK LMESRTYLQN LPYFDRLDYV GTMNQEHAWC LAIERMTGTD VPRRAQLIRV
LYCEIGRILN HLLNVTTQAL DVGALTPPLW GFEEREKLMI FYERASGARL HAAYFRPGGV
HQDLPPELIE DIDTWAHEFP QMLDDIDGLL SENRIFKQRN VDIGVVTEED IQNWGFSGVM
VRGSGFAWDL RRAQPYECYD EFEFQIPVGK NGDCYDRYLC RMAEMRESTK IIHQACEKLR
NEPGEIMSRG KMSPPSRGDM KTSMEALIHH FKLYTEGFHV PEGEIYACVE APKGEFGVFL
VADGTNKPYR AKLRAPGFAH LQAMDYLCKG HQLADVSAVL GSLDIVFGEV DR
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