| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1171 |
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| Symbol | |
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| ID | 3933615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1135516 |
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| End bp | 1136139 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903519 |
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| Product | NADH dehydrogenase subunit C |
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| Protein accession | YP_509113 |
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| Protein GI | 89053662 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATG CCCTGAAAGA ACTGGCCGAA TATCTGTCCG AGAAGCGCTC GGACGATGTG
GTGTCCACCG ATGTTAACGC GATGGGAGAG TTGAGCGTCA CCGTCGCGCC CGCGCAGATG
GTGGGGTTCA TCGAGTTCCT CAAGACCGAC CGCACCTGCC GGTTCTCGAC CCTGATCGAC
ATCACGGCGG TCGATTACCC CAGCCGGGAC CGCCGGTTTG ACGTGGTCTA CCACTTCCTC
AGCATGTACC AGAACCACCG CGTGCGCGTG CGAGCCGCGA TCCGGGAGGA GGACACGCTG
CCGTCGATCA GTGGCGTGCA TCCAGGCGCG GGCTGGTACG AGCGGGAGAT CTACGACATG
TTCGGGATCC TGTTCACCGG CCATGCGGAC CTGCGCCGCC TGCTGACGGA TTACGGCTTC
CGCGGCCACC CGCTGCGCAA GGATTTCCCC ACCACCGGCT ACACCGAAGT GCGCTATGAC
GAAGAGCTGA AACGTGTCGT CTATGAGCCG GTGAGCCTGG TCCAGGAATA CCGCCAGTTT
GATTTCATGT CCCCCTGGGA AGGCGCGCAA TACGTGCTGC CGGGCGATGA GAAGGCGGAC
GACAAAGCGG GGGAGACGGC ATGA
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| Protein sequence | MSDALKELAE YLSEKRSDDV VSTDVNAMGE LSVTVAPAQM VGFIEFLKTD RTCRFSTLID
ITAVDYPSRD RRFDVVYHFL SMYQNHRVRV RAAIREEDTL PSISGVHPGA GWYEREIYDM
FGILFTGHAD LRRLLTDYGF RGHPLRKDFP TTGYTEVRYD EELKRVVYEP VSLVQEYRQF
DFMSPWEGAQ YVLPGDEKAD DKAGETA
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