| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1164 |
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| Symbol | |
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| ID | 3933608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1130340 |
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| End bp | 1130996 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637903512 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_509106 |
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| Protein GI | 89053655 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.720866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.242245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT CGACACCACT CTCCCGACCG TCGTTGCATG AAGAACTGGT AACGCGCTTG
CGGCAGGCCA TTGTCCAGGG TGCGTTGGAA CCTGGCGTAA AGGTACCTGA ACGGGAATTA
TGCGAAAACC TGGGCGTGTC GCGCACACCT TTGCGCGAAG CATTGAAGGT GCTTGCCAAC
GAAGGTCTTG TGGTTCTGGA GTCCAACAAG GGCGCCCGAA TTTCCAAAGT GACGATGGAG
CAGTTGGAAG ACGCCTTTCC GGTGATAGCC GTGCTCGAAG GTCTGGCCGG AGAGCTGGCC
TGCAAACTGG CCACAGATCA AGAGATTGCC GACCTCGTTG CCCGCCATGA CGACATGTTT
CAGCATTACA AGTCTGGCGA CAGACCCGCC TATTTCCAGG CCAATCGCGA TATCCATGCC
GGACTTATGG CAGCAGCGCG CAACGAGGTG CTGACACAAC ATTACGCGAT GCTGTCCTCG
CGGGTGGAGC GGGCCCGGCT TCTGGCGAAT ATGTCCGACA TCCGCTGGGC CGAGGCTGTC
GAGGAGCACC GCTCTATTGT CAAAGCGATT GAAGCGCGCG ATGGCACCCG CCTCAGTTCG
CTGCTCCGGA CGCACCTAAA CAACAAACTA GCCGCGTTGA GAAAGGCGTT GTCATGA
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| Protein sequence | MNLSTPLSRP SLHEELVTRL RQAIVQGALE PGVKVPEREL CENLGVSRTP LREALKVLAN
EGLVVLESNK GARISKVTME QLEDAFPVIA VLEGLAGELA CKLATDQEIA DLVARHDDMF
QHYKSGDRPA YFQANRDIHA GLMAAARNEV LTQHYAMLSS RVERARLLAN MSDIRWAEAV
EEHRSIVKAI EARDGTRLSS LLRTHLNNKL AALRKALS
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