| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1162 |
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| Symbol | |
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| ID | 3933606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1126131 |
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| End bp | 1127327 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637903510 |
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| Product | aminotransferase, class V |
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| Protein accession | YP_509104 |
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| Protein GI | 89053653 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000700049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.406686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGA GAAAAGCTGG TCGGCATTTT CTACAGATCC CCGGGCCAAG TGCCGTGCCG
GACCGCATCC TGCGGGCGAT CAGTGCGCAA ACCATCGACC ATCGCGGTCC CGATTTCGCC
GCAGTGGGCA AGGCTGCGCT GGACGGGATG AAGACCATCT TCAAAACCGA AAGCGCAAAT
GTTGTGATTT ATCCGGCGTC GGGCACAGGG GCGTGGGAGG CTGCGCTGAT CAACACGCTG
TCTGAAGGTG ACCGGGTCCT GATGTATGAA ACTGGCCATT TTTCGATGCT ATGGATGAAA
ATGGCGCGCA AACTGGGCCT CAACCCCGAA TTTATCGAAG GCAATTGGCG CGGGGGTGCA
GATCCAGAGG CGATTGCTGA TTATCTGCGC AGTGACAAGA ACCACGACAT CAAGGCGGTT
TGCGTGGTGC ATAATGAAAC GTCAACCGGG TCTGTTTCGC CAATTGCGGA CGTTCGCGCG
GCTATTGATG ACATTGGCCA TCCCGCGCTT TTGATGGTCG ACAGTATTTC CGGCCTCGCT
TCGGTCGATT TCCGGTTTGA CGAATGGGGG GTGGATGTCT GCGTTTCCGG CTCTCAGAAG
GGTCTTATGT TGCCCCCAGG GATTTCATTC AACTGCGTTG GCGAACGCGC ACTGGACATA
TCGCGCAAAG GCGGCATGCG CCGGTCCTAC TGGGATTGGG GTGAAATGGT GCAGATGAAC
AAGACGGGCT ACTTCCCCTA CACCCCTGCG ACCAACATGC TTTATGGCCT CAACGAAGCC
ATCGCCATGC TGCACGAAGA AGGGCTGGAC GAGGTCTTTG CCCGCCATAA CCGACATGCC
GAGGCCACGC GCGCCGCCGT GCGTGCCTGG GGACTTGAGG TCCTATGCGC CCAGCAAGGC
CAGGAGAGTG GCGTTCTGAC GGCCGTTTTG ATGCCCGAAG GGCAAAGTGC GGATGCATTC
CGCGCCGCAA CGCTGAAGAA TTATGACATT TCTTTAGGCA ACGGATTGTC TAAAGTTGCC
GATCGCGTGT TCCGGATCGG TCACTTGGGC GACTTTAACG ATGCGATGTT GCTGGGTACC
CTATCAGGTA TTGAAATGGG CTTAGGCAAG TCTGGCGTGC CTCACGAGAA GGGTGGCGTC
AGTGCAGCGA TTGCAGTTCT CGGAGGAGAC GCATCGCACC CCATGGCCGC CGAATAG
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| Protein sequence | MTSRKAGRHF LQIPGPSAVP DRILRAISAQ TIDHRGPDFA AVGKAALDGM KTIFKTESAN
VVIYPASGTG AWEAALINTL SEGDRVLMYE TGHFSMLWMK MARKLGLNPE FIEGNWRGGA
DPEAIADYLR SDKNHDIKAV CVVHNETSTG SVSPIADVRA AIDDIGHPAL LMVDSISGLA
SVDFRFDEWG VDVCVSGSQK GLMLPPGISF NCVGERALDI SRKGGMRRSY WDWGEMVQMN
KTGYFPYTPA TNMLYGLNEA IAMLHEEGLD EVFARHNRHA EATRAAVRAW GLEVLCAQQG
QESGVLTAVL MPEGQSADAF RAATLKNYDI SLGNGLSKVA DRVFRIGHLG DFNDAMLLGT
LSGIEMGLGK SGVPHEKGGV SAAIAVLGGD ASHPMAAE
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