| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1158 |
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| Symbol | |
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| ID | 3933602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1121833 |
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| End bp | 1122654 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637903506 |
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| Product | hypothetical protein |
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| Protein accession | YP_509100 |
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| Protein GI | 89053649 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.441792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.170039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACAC GCCTGACCCG CGCCCTTCGC TGCGCCATAG TGACGTCCCT CTTGCTCGGC
GCACCTATGG CGGCCGTGGC TGCCACCTGC GGCAATGACG CCTCCGGTTT CGCCCGCTGG
CAGCAGGAAT TCGCAGCGGA AGCCGCCGCC GCAGGTGTCG GTCAAGCCGG GTTGCAAGCT
CTGGCCGCCA CGACTTATGC CACGCGCACG ATCTCGGCAG ACCGCAATCA GCGCTCCTTC
AGTTATTCCC TCGAAGAGTT CATGCGAATT CGTGGTGCCG ATGCGATTGT GCGGCAAGGT
CGGCAGCGGA TCGCTGCAAA CCCTGAATTT TACGCCTCGC TCGAGCGTGC TTACGGCGTA
CCCGCGGCAG TGATCGTCGC TATTCACGGA ATGGAAACCG GTTTTGGCAA TTTCATGGGC
GATGCAAACG TCGTCTCGGC CATTGCAACG CTTGCCTATG ACTGCCGCCG CTCGGCCTTT
TTCAGCGAAC ATGCGTTGGC CGCGCTCATT CTCGTGGATC GCGGCGCAAT CAGCCCCAAT
TCAATCGGCG CGATGCATGG TGAACTCGGG CATACGCAAT TCTTGCCGGG CAACGTTCTG
CGCTACGGCG TAGATGGCAA TGGCGACGGG CGCATAGATC TGAGTAATTT TACCGATGCC
ATGGCGTCGA CCGCGAACTT TCTGCGCCAG AACGGCTGGC GGCAAGGCCG AGGCTACCAG
GAAGGCCAAC GCAATTTTAG GGCAATCCAA GCGTGGAATG CGGCGCCGGT CTATCAGCGC
GCCATTGCGA TCATGGCGAG CCGGATAGAA GGCCAGTCCT AA
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| Protein sequence | MHTRLTRALR CAIVTSLLLG APMAAVAATC GNDASGFARW QQEFAAEAAA AGVGQAGLQA
LAATTYATRT ISADRNQRSF SYSLEEFMRI RGADAIVRQG RQRIAANPEF YASLERAYGV
PAAVIVAIHG METGFGNFMG DANVVSAIAT LAYDCRRSAF FSEHALAALI LVDRGAISPN
SIGAMHGELG HTQFLPGNVL RYGVDGNGDG RIDLSNFTDA MASTANFLRQ NGWRQGRGYQ
EGQRNFRAIQ AWNAAPVYQR AIAIMASRIE GQS
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