| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1154 |
|---|
| Symbol | |
|---|
| ID | 3933598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1115977 |
|---|
| End bp | 1116342 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637903502 |
|---|
| Product | NADH dehydrogenase subunit A |
|---|
| Protein accession | YP_509096 |
|---|
| Protein GI | 89053645 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.398704 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC TTCTCACCGA ATACGCCCCG ATCCTGATCT TTCTGGGACT GGCCATTGGC
CTGGCTTTGG TGCTGATCCT CGCGGCGGTG GTGGTCGCAG TCAGCAACCC GGACCCCGAA
AAGGTCAGCG CCTACGAATG CGGCTTCAAT GCGTTCGATG ATGCGCGGAT GAAGTTCGAT
GTGCGCTTCT ATCTGGTGGC GATCCTGTTC ATCATCTTTG ACCTGGAAAT CGCCTTCCTG
TTCCCCTGGG CCACGGCCTT CCCGGGCCTC AGCGATCTGG CATTCTGGTC GATGATGGTG
TTCCTGGGCG TGCTGACCAT CGGCTTTGCC TATGAGTGGA AGAAGGGTGC GCTGGACTGG
GAGTGA
|
|---|
| Protein sequence | MTELLTEYAP ILIFLGLAIG LALVLILAAV VVAVSNPDPE KVSAYECGFN AFDDARMKFD
VRFYLVAILF IIFDLEIAFL FPWATAFPGL SDLAFWSMMV FLGVLTIGFA YEWKKGALDW
E
|
|---|
| |