| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1141 |
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| Symbol | |
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| ID | 3933585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1102176 |
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| End bp | 1103192 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637903489 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_509083 |
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| Protein GI | 89053632 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.487634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.166905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGG AATTGTACCG CGTTCTTGAA CTACAAAAAC CGGTGATATC GGCCCCGATG
GGCGGGGCTG CGGGGCCCGA CCTTGTGGCG GCGGTCTGCA ATGCGGGCGG CTACGGTGTG
ATCCCGCTTT GGGGCAAGCC GGTTCCGCAA CTCATGGCCG GAATTGACGC GGTCCGTGCG
CTGACGGATC GCAACTTCGC GGTGAACCTG AACCTGTCGT TTGATTTTGA GGATCAGTTG
AGCGCCTGCA TCGCGGCGGA GGTTCATGCC GTTTCGCTGT TTTGGGGGCA GGCCCCGTCG
GCGATTACGC GGGCGAAGGA GGGCGGCTTG GTCGTTTTCG TCAGCGTCGG ATCGGTCGCC
GAGGCCGTGG CGGCTGAGGC GGCGGGCGCG GATATCATCG TCGCCCAGGG GTGGGAGGCA
GGCGGTCACG TCTGGGGGCA GGTCAGCACA CTTGCCCTGG TCCCGGCGGT GGCCGATGCC
GTGACGGTGC CCGTCGTGGC GGCCGGCGGG ATCGCCGATG GCCGCGGCAT GGCGGCGGCG
CTGATGCTGG GGGCTGCGGG CGTCTGGATC GGAACGCGGT TTCTTGCAAG CCGCGAGGCG
ACGATCCATG CGGCGTACCT TGCGCGTGTT CTGGCGGCCT CGGAGGTCGA CACGGAGTGG
TATTCCGACC TCTACGATGT CGCATGGCCC GACGCGCCGC ATCGGGCGCT GCGCAATTCG
ACAGCGCGCG CGTGGCGGGG GGCCGGTGCC CCTGCGCCGG GGGACCGCCC CAATGAGCGT
GAGGTGATCG GACACCGCCC GGAGGGCGAT CCGGTGGTGC GATACCAAAG CTATACGCCG
CTTCCCGACA CCACCGGCGA TGTGGAGGCC ATGTCATTGT GGGCCGGTCA GGGGGTTGGC
CTTGTCCGGG AGGTGCAGGG CGCGGCAGAG ATATTGTCCG AGATATACGA ACAGGCGCTG
GACTGTCTGC GCAAGGCGCC GGGCGCGATG GGTGCGGACC AGGGCGCGCA GAGATAG
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| Protein sequence | MTSELYRVLE LQKPVISAPM GGAAGPDLVA AVCNAGGYGV IPLWGKPVPQ LMAGIDAVRA
LTDRNFAVNL NLSFDFEDQL SACIAAEVHA VSLFWGQAPS AITRAKEGGL VVFVSVGSVA
EAVAAEAAGA DIIVAQGWEA GGHVWGQVST LALVPAVADA VTVPVVAAGG IADGRGMAAA
LMLGAAGVWI GTRFLASREA TIHAAYLARV LAASEVDTEW YSDLYDVAWP DAPHRALRNS
TARAWRGAGA PAPGDRPNER EVIGHRPEGD PVVRYQSYTP LPDTTGDVEA MSLWAGQGVG
LVREVQGAAE ILSEIYEQAL DCLRKAPGAM GADQGAQR
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