Gene Jann_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1136 
Symbol 
ID3933580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1097831 
End bp1098271 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content68% 
IMG OID637903484 
Producthypothetical protein 
Protein accessionYP_509078 
Protein GI89053627 
COG category[S] Function unknown 
COG ID[COG4103] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.863269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.342516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCAG ATCTCCTCGC CCGCCTCACC GCGCCCACGC CCGAACCCCT CGCCCCTGCC 
GATGCCCGGC TTGCGCTCGC CGCCCTGCTG GTGCGCATTG CCCGCTCCGA TGGCGATTAC
GCCGCCGTGG AAATCGCCCG CATCGACGCG CTTCTGGCTG ATCGCTATGG CCTCCTGCCC
GGTCAGGCCA AGACCTTGCG CGCCCAGGCG GAGGGGTTGG AAACCCAGGC CCCCGATACC
GTGCGCTTCA CCCGCGCCAT CAAGGACGCG GTGGAGTATG ACGACCGTCT CGACGTGATC
GAAGCCCTAT GGGACGTGGT TCTGGCCGAT GGGGAACGCG ACGATGTCGA AGACGCCCTG
ATGCGCATGG TGGCCCCGAT GCTTGGCATC ACCGACCGTG ACAGCAACCT CGCCCGCCGC
CGGGTTGAGG CCAGCCGCTA A
 
Protein sequence
MISDLLARLT APTPEPLAPA DARLALAALL VRIARSDGDY AAVEIARIDA LLADRYGLLP 
GQAKTLRAQA EGLETQAPDT VRFTRAIKDA VEYDDRLDVI EALWDVVLAD GERDDVEDAL
MRMVAPMLGI TDRDSNLARR RVEASR