Gene Jann_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1134 
Symbol 
ID3933578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1096130 
End bp1096912 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID637903482 
ProductABC transporter related 
Protein accessionYP_509076 
Protein GI89053625 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.795588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC CCGTGCCGAC ACCGGTAATC GAGATCAAAG GCCTGCACAA AAGTTTCGGC 
GCCTTGGACG TGCTGAAAGG CGTGGACCTC TCGGCCAATG CGGGCGATGT GGTATCGCTA
ATCGGGTCGT CGGGCTCTGG CAAATCCACG CTTCTGCGCT GTGCCAACCT GCTGGAAGAC
AGCCAGCAGG GCGACATCAT CTTTGAAGGC GACCCGATCC GCTGGAAGGG CAATGGCCAC
GCCCGTCGCC CCGCCGATGC GGAACAAATC CGCCTGATCC GCACGAACCT GTCGATGGTG
TTTCAATCCT TCAACCTCTG GTCCCACATG ACCATCCTGC AAAACGTGAT GGAGGCCCCG
GTGACGGTCC TGGGCGAGGA GCGCGCCGAG GTTGAGGACC GCGCCCGCAC GATCCTTGAC
AAGGTGGGCA TCGGCGCAAA ATGCGACGCC TGGCCGTCAG AGCTGTCGGG CGGCCAGCAG
CAACGCGCCG CCATCGCGCG TGCGCTGTGC ATGCAGCCCC GCGCGCTTCT GTTTGATGAG
CCGACAAGCG CGCTGGACCC GGAACTGGAA CAGGAGGTGA TCCGCGTGAT CCGTGATCTG
GCCGAGGAAG GCCGCACCAT GATCCTTGTC ACCCACGACA TGCGCATGGC GCGCGATCTG
TCGACCCGGA CGATCTTCCT GCATCAGGGT CTTATCGAAG AACAAGGCCC CCCGTCGGAG
CTGTTTCGCC ACGCGAAATC CGACCGCCTG CGCCAGTTTC TCAGCCATTC CGAGATGGCC
TGA
 
Protein sequence
MTAPVPTPVI EIKGLHKSFG ALDVLKGVDL SANAGDVVSL IGSSGSGKST LLRCANLLED 
SQQGDIIFEG DPIRWKGNGH ARRPADAEQI RLIRTNLSMV FQSFNLWSHM TILQNVMEAP
VTVLGEERAE VEDRARTILD KVGIGAKCDA WPSELSGGQQ QRAAIARALC MQPRALLFDE
PTSALDPELE QEVIRVIRDL AEEGRTMILV THDMRMARDL STRTIFLHQG LIEEQGPPSE
LFRHAKSDRL RQFLSHSEMA