Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1134 |
Symbol | |
ID | 3933578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1096130 |
End bp | 1096912 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637903482 |
Product | ABC transporter related |
Protein accession | YP_509076 |
Protein GI | 89053625 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.795588 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAC CCGTGCCGAC ACCGGTAATC GAGATCAAAG GCCTGCACAA AAGTTTCGGC GCCTTGGACG TGCTGAAAGG CGTGGACCTC TCGGCCAATG CGGGCGATGT GGTATCGCTA ATCGGGTCGT CGGGCTCTGG CAAATCCACG CTTCTGCGCT GTGCCAACCT GCTGGAAGAC AGCCAGCAGG GCGACATCAT CTTTGAAGGC GACCCGATCC GCTGGAAGGG CAATGGCCAC GCCCGTCGCC CCGCCGATGC GGAACAAATC CGCCTGATCC GCACGAACCT GTCGATGGTG TTTCAATCCT TCAACCTCTG GTCCCACATG ACCATCCTGC AAAACGTGAT GGAGGCCCCG GTGACGGTCC TGGGCGAGGA GCGCGCCGAG GTTGAGGACC GCGCCCGCAC GATCCTTGAC AAGGTGGGCA TCGGCGCAAA ATGCGACGCC TGGCCGTCAG AGCTGTCGGG CGGCCAGCAG CAACGCGCCG CCATCGCGCG TGCGCTGTGC ATGCAGCCCC GCGCGCTTCT GTTTGATGAG CCGACAAGCG CGCTGGACCC GGAACTGGAA CAGGAGGTGA TCCGCGTGAT CCGTGATCTG GCCGAGGAAG GCCGCACCAT GATCCTTGTC ACCCACGACA TGCGCATGGC GCGCGATCTG TCGACCCGGA CGATCTTCCT GCATCAGGGT CTTATCGAAG AACAAGGCCC CCCGTCGGAG CTGTTTCGCC ACGCGAAATC CGACCGCCTG CGCCAGTTTC TCAGCCATTC CGAGATGGCC TGA
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Protein sequence | MTAPVPTPVI EIKGLHKSFG ALDVLKGVDL SANAGDVVSL IGSSGSGKST LLRCANLLED SQQGDIIFEG DPIRWKGNGH ARRPADAEQI RLIRTNLSMV FQSFNLWSHM TILQNVMEAP VTVLGEERAE VEDRARTILD KVGIGAKCDA WPSELSGGQQ QRAAIARALC MQPRALLFDE PTSALDPELE QEVIRVIRDL AEEGRTMILV THDMRMARDL STRTIFLHQG LIEEQGPPSE LFRHAKSDRL RQFLSHSEMA
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