| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1132 |
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| Symbol | |
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| ID | 3933576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1094512 |
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| End bp | 1095234 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903480 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_509074 |
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| Protein GI | 89053623 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.768182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAACC TGATTCTGGC GACAACCGCC CTGACGCTGA CCGCCGGCAT GGCCTTCGCC
CAGGACACCG TCCGCATGGG CACCGAGGGC GCCTACCCCC CCTACAACTT CATCAACGAT
GCAGGCGAAG TGGACGGGCT GGAGCGCGCC CTGGGCGATG AGCTGTGCGC CCGCGCCGAG
CTGACCTGCG TGTGGGTCAC CAACGATTGG GACAGCATCA TCCCGAACCT GACGTCGCGC
AACTACGACA CGATCATTGC CGGCATGAGC ATCACCGAAG ACCGCGAGGA AGTCATCGAC
TTCACCCAGG CCTACATCCC GCCCACGCCC TCGCTTTACA TGGCGATGGA CGAGGATGTC
TCGCTCGACG GCGCGGTGAT CGCGGCCCAG ACCAACACCA TCCAGGCGGG CTATGTGGCC
GGTCTTGAGG GCGTCACGCT GGTGGAATTC GCCACCCCCG ATGAGACGGT CGCCGCCGTG
CGCAACGGTG AGGCCGACGC GGTTCTGGCC GACAACGACT TCCTCACCCA GATCGCCGAT
GAAGATCCCG ACATGATGAT CGTGCTCGAT CCCGTGTCGC TTGGTGACGG CGTTGGCATG
GGCCTGCGTG AGGGCGATGA GCTGATCGCC GTCTTCGACG CGGCCATCAC GTCGATGAAG
GAAGACGGCA CGCTGAACGC GCTGCTGGAA GAATGGTTCG GCGAAAACGC CGTGACCTGG
TAA
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| Protein sequence | MKNLILATTA LTLTAGMAFA QDTVRMGTEG AYPPYNFIND AGEVDGLERA LGDELCARAE
LTCVWVTNDW DSIIPNLTSR NYDTIIAGMS ITEDREEVID FTQAYIPPTP SLYMAMDEDV
SLDGAVIAAQ TNTIQAGYVA GLEGVTLVEF ATPDETVAAV RNGEADAVLA DNDFLTQIAD
EDPDMMIVLD PVSLGDGVGM GLREGDELIA VFDAAITSMK EDGTLNALLE EWFGENAVTW
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