| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1128 |
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| Symbol | |
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| ID | 3933572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1089406 |
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| End bp | 1090773 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903476 |
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| Product | hypothetical protein |
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| Protein accession | YP_509070 |
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| Protein GI | 89053619 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain
[TIGR03370] variant PEP-CTERM putative exosortase signal, Roseobacter type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.118431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.445034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCAC TCGCCCAAGC CGCTTTTGCG GCCACTCTCG CCCTGTCCGC CACCCTGCTC
CACACCCAGG CCCAGGCCGC GCCAGTCTCA ACGGTGCCAG GCCCGAACGC ACCGCAATAC
ATTGATGTTC GGTTCAACTT CTTCAACCTC GCCAATGGGT TCAACGCCGT GGAAGGCGTG
GTGCGCGGTC TGTCGCTATC GGGCACAAGC GCGGCCTATT CCGTTGAAAT CACGGCAAAT
TCCGCAGGCT TCGGGATCGG GGAATATGTT GGCAACCCGC TGGCCAATTC CTGGACCGTC
TTGAACGGAG AGATCACCCA GTTCGAGTTC TACTCCGCCG GTGCGTTCAA CACGGCCCCC
ACCGTCACCA CCGCCACCTT TGGCCTGAGC AACACGCCGG GCTCCCCCAT TGAAGGAGAG
ATCGGCCTCG GCGCGTCCTG GGCTGACGCA GAAACGGAAG ATCTCGACGG CTCCGGCCTC
TATTTCACCG CCCTGCGCCG CTACGACAGG CTGCCCGTCC CCCGGACGCG GACGCAGCTG
GCCGGGGCCA TATCCCGGGC AAACCTGTCC GAAACCGCCG CCGTTGCGCC CGTGCCATTG
CCTGCGGGGA TCTGGCTGTT GCTGGCGAGC CTTGCGGGCA TGACCGGCCT GCGCCGCCTG
TCCGCGCGGC CCAAACGGAG CACTCCCATG GCAACGATGG CCGGGTCGCT GGCGCTGTGT
CTCGGTGCTG CGTCCGCCGC CCAGGCAACA CCCGTTGGGG TCTTCACTGG GACGCCACCG
GCGAATTACT ACGATTATTC CTTTCGCTTC GTCGACGCCG TCACCAACGA CATCTCAGCC
GGTATCATCC GTGGCCTCAG CGCCAATGGC ACAAGTGCTG CCTACAGCGT AGAGGTGACG
GCCAGCCAGG GCGTGTTCGG CATGGGCGAA TATGTGGGCA CGCCCATCCC GAACCTCTGG
ACCGTACAGA ACGGCGTGAT CCAATCGGTG GAGTTTTTCA GCTATGGCGC TGCCAACACC
GCGCCCGCTG TCACGACGTC CACCCTGATC TTCAGTTCAA ATGCCAGCAT GGCGGAGGCC
TATAGCGGGG CCCATGCCAA CCATCCCATC GCGGCTGGCT TCCCCGAAAA TGCTGAAACC
GGCCTGACAT TCGAGGTCTT GAGCAGTTAC CACAGCCTGC CGTTGACTGC CTGGGGCGGG
GCGGCTCCCC GTGTGCCGGA TGCAAACCCG TTTCCCACGC GCGGCACAGC CCGCAGCATG
GCCGCTGTCT CGGAGGTATC CGTTGCCCCC GTGCCCTTGC CCGCTGGCGT CTGGCTCCTC
TTGGTGAGCC TCGGCGGTCT GGCGGGCCTG CGCCGTCTGC GCGCCTGA
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| Protein sequence | MTPLAQAAFA ATLALSATLL HTQAQAAPVS TVPGPNAPQY IDVRFNFFNL ANGFNAVEGV
VRGLSLSGTS AAYSVEITAN SAGFGIGEYV GNPLANSWTV LNGEITQFEF YSAGAFNTAP
TVTTATFGLS NTPGSPIEGE IGLGASWADA ETEDLDGSGL YFTALRRYDR LPVPRTRTQL
AGAISRANLS ETAAVAPVPL PAGIWLLLAS LAGMTGLRRL SARPKRSTPM ATMAGSLALC
LGAASAAQAT PVGVFTGTPP ANYYDYSFRF VDAVTNDISA GIIRGLSANG TSAAYSVEVT
ASQGVFGMGE YVGTPIPNLW TVQNGVIQSV EFFSYGAANT APAVTTSTLI FSSNASMAEA
YSGAHANHPI AAGFPENAET GLTFEVLSSY HSLPLTAWGG AAPRVPDANP FPTRGTARSM
AAVSEVSVAP VPLPAGVWLL LVSLGGLAGL RRLRA
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