| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1117 |
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| Symbol | |
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| ID | 3933561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1076535 |
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| End bp | 1078373 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637903465 |
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| Product | Poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_509059 |
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| Protein GI | 89053608 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.165584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGACA AAAACGAAGA TGACGTTAAG GCGGAAACCA CGGCTCCTGA CGGGCCCGAA
GCGCTGGAGC GGTTGAACGC CAATCTTGCG AAGGTGGAAG GCCTGTCGAA GCGGCTTGTG
GCCGCGATGG GGCATCGCGC GCCGTCCGAT CAGGGGCTGT CGGGGCCGGG GCAGGAACTC
TACGTGAAAG CAGGCGCGGC CTATTGGGCG GACGCCATGG CTAACCCCAC GAAATTGCTG
GAACAACAGG CACAGTTCTG GGGTCAGGCC ATGTCCACCT ATATGGAGAT GCAGGAGGCC
ATCGCATCGG GCCAATTGCC GCTTCTGGAC GATGATGACC TGCCCGCCGA CATGGCCCGC
GACAAGCGCT TTTCCAACCC GCTCTGGCGC ACGCATCCCT ACTTCAATTT CGTGCGTCAC
CAATATGTGA TGGGGTCCGA GGCGATCCGC AAAGCGGTCT CTGACCTCGA CGGGCTGGAG
CCGCAGGACA AGCAGCGGGT GGAGTTCTTC GCCACCCAGG TGATTGAGCT GTTCTCGCCC
ACCAACTACT TCGGCACCAA CCCCGACGCG CTGGAAAAAG CGGTGGAGAC CGATGGCGAA
AGCCTTGTGC ACGGGCTGGA AAACCTTGTG CGGGATATCG AGGCCCATGG CGGGGAGTTG
CTGCCCACGC TCGCCGATCC GGACGCGTTT GAAGTTGGCA CCAACATCGG CACCACCGAA
GGCAGCGTCG TCTACCGCAA CCGGATGATG GAGTTGATCC AATACGCGCC CACGACCGAG
TTGGTCCACA AGACGCCTTT GGTGATCTTT CCGCCCTGGA TCAACAAGTT CTACATCCTG
GACCTCAAAC CCCAGAACAG CCTGATCAAA TGGCTTGTGG GCCAAGGCTA CACCCTGTTC
GTGGTCAGCT GGAAGAACCC CGATGACACC TATGCCGATG TGGGTCTTGG TGACTATGTC
GAAGACGGCT ACCTCGCCGC CGTCGAACAG GTGAAGGAGA TCACCGGCGA AAAGCAGGTC
AACGCCGTGG GCTATTGCAT CGCCGGTACG ACCCTGAACC TGACGCTCGC GCTGATGAAG
AAGCGCGGCG ACACGTCGAT CAAGTCGGCC ACCTTCTTCA CGACGCTCAC GGATTTCTCG
GTGCAGGGCG AATTCACACC GTTCCTACAA GATGATTTTG TCGATGCGAT TGAACGGCAG
GTGGATCAGG ACGGCGTGCT CAACAGCTAT TTCATGTCCA AGACCATGTC GTTCCTGCGC
TCCAAGGATC TGATCTACGG GCCCGCCGTG CGCTCCTACA TGATGGGGGA GGCGCCGCCC
GCCTTTGACC TGCTCTACTG GAATGGCGAT AGCACCAACC TGCCCGGCAA GATGGCGATG
GAATACCTGC GCGGCCTGTG TCAGGGCGAT CAACTCGCCT CGTCGGGGTT TGACCTGTTT
GGCGAGTCGC TCTCCCTGAA AGACGTGACC GTGCCCCTCT GCGCCATTGC CTGCAAAACG
GATCACATCG CGCCCTGGGT CGATTGTTAT CGCGGCGTGA CCAAGATGGG ATCGCGCAGC
AAGACGTTCA TCCTGTCGGA ATCCGGCCAC ATCGCGGGCA TCGTGAACCC GCCATCGAAG
AAGAAATACG GCCATTTCAC CAATGACGCC GTGAAGGGGG AGGCCGCAGA CTGGTTTGAG
GGCGCGACCC ACAACGATGG CTCGTGGTGG CCGCTCTGGG GGACGTGGCT GTCCAAGCGG
TCCGGCAAGC AAATTGCTGC ACGTGCACCG GGTGAGGATG GCCGAGAAAT TTTGGGTCCG
GCCCCCGGAA CCTACGTCAA GGAAGGCAAA ACTAACTGA
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| Protein sequence | MSDKNEDDVK AETTAPDGPE ALERLNANLA KVEGLSKRLV AAMGHRAPSD QGLSGPGQEL
YVKAGAAYWA DAMANPTKLL EQQAQFWGQA MSTYMEMQEA IASGQLPLLD DDDLPADMAR
DKRFSNPLWR THPYFNFVRH QYVMGSEAIR KAVSDLDGLE PQDKQRVEFF ATQVIELFSP
TNYFGTNPDA LEKAVETDGE SLVHGLENLV RDIEAHGGEL LPTLADPDAF EVGTNIGTTE
GSVVYRNRMM ELIQYAPTTE LVHKTPLVIF PPWINKFYIL DLKPQNSLIK WLVGQGYTLF
VVSWKNPDDT YADVGLGDYV EDGYLAAVEQ VKEITGEKQV NAVGYCIAGT TLNLTLALMK
KRGDTSIKSA TFFTTLTDFS VQGEFTPFLQ DDFVDAIERQ VDQDGVLNSY FMSKTMSFLR
SKDLIYGPAV RSYMMGEAPP AFDLLYWNGD STNLPGKMAM EYLRGLCQGD QLASSGFDLF
GESLSLKDVT VPLCAIACKT DHIAPWVDCY RGVTKMGSRS KTFILSESGH IAGIVNPPSK
KKYGHFTNDA VKGEAADWFE GATHNDGSWW PLWGTWLSKR SGKQIAARAP GEDGREILGP
APGTYVKEGK TN
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