Gene Jann_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1110 
Symbol 
ID3933554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1070220 
End bp1070717 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content65% 
IMG OID637903458 
Producthypothetical protein 
Protein accessionYP_509052 
Protein GI89053601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.463122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.139688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAG CCGCCCTTGT CGCCACCCTA CTTGCCAGCC CCGTCGCAGC GGAGGGATTT 
GCCGTATCTG ATCTGCAAAC CCTCTCGGTT GATCTGTCGG CCTTGTCTGG CGGGACCTTT
TTGGCCGAAG CCACCTCGCC GCAGCGATTG ACGATCATGT GCACGGATTG CGCAGCCTTC
CAGGCCATAG ACGTGCGCAT CGGTCGCCAG GACGACGGCA CGGAGGCGCG GCTGCGCGCA
GGCCAGACCA CCATCGGTGA TGTCCGCGCG ATGTGTCAGG CCCGTGATCC GTCCTGCACG
CTGGAGGGGA TCGAACAGGG CCGCGCCATC GGTTGGCTCA CCACCTATGA CGGTGCTGTG
ACGGGCAGCA CGGCGCTGTT GTTTCTGGAT GGCGATCTGC TGACGATCCG GTCCATCGCC
GATGATGTCA CCACGGCGCG CCGCAACGTC GATGGCGTGC GCGCGGCCCT GGTCCCGGTG
ATTGTGGGGT CGGAATGA
 
Protein sequence
MKAAALVATL LASPVAAEGF AVSDLQTLSV DLSALSGGTF LAEATSPQRL TIMCTDCAAF 
QAIDVRIGRQ DDGTEARLRA GQTTIGDVRA MCQARDPSCT LEGIEQGRAI GWLTTYDGAV
TGSTALLFLD GDLLTIRSIA DDVTTARRNV DGVRAALVPV IVGSE