| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1094 |
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| Symbol | |
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| ID | 3933538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1056235 |
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| End bp | 1056441 |
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| Gene Length | 207 bp |
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| Protein Length | 68 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637903442 |
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| Product | cold-shock DNA-binding protein family protein |
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| Protein accession | YP_509036 |
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| Protein GI | 89053585 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0243204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAAGCG GCACTGTTAA ATGGTTCAAC ACCACCAAAG GATTTGGGTT CATCGCCCCG
GATGACGGCG GCAAAGACGT CTTCGTCCAC ATCTCCGCCG TCGAGCGCGC AGGTTGGAGC
GATCTGCCCG ACGACACGAA ACTCACCTAC GAGCTGCGCG AGGGCCGGGA CGGCCGCGAA
AGCGCGGTGG AGTTGGTGAA GGTCTGA
|
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| Protein sequence | MPSGTVKWFN TTKGFGFIAP DDGGKDVFVH ISAVERAGWS DLPDDTKLTY ELREGRDGRE
SAVELVKV
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