| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1091 |
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| Symbol | thyX |
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| ID | 3933535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1053758 |
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| End bp | 1054714 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903439 |
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| Product | FAD-dependent thymidylate synthase |
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| Protein accession | YP_509033 |
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| Protein GI | 89053582 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0284091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCCTC TAGCCGCTCG CCCCAACCGA TTCCGTAGCA TTAGGACCTT TGTCATGCCG
CTCACCCCTG AACAACTGGA GGATATCCAG AATTCCCGCG CCAATCCCCA GCCGACGCTG
CGTGCGGTCG CCCCGGGGAT GGAGCAGCAC CTTTATGAGG CGAAACCGGT CCTCGACCAC
GGCTTCGTGC GGGTCATCGA CTATATGGGC GACGACGCGG CCATCGTGCA GGCGGCGCGG
GTCAGCTACG GGGCGGGGAC GAAAAAGGCG CGCGATGACA GCGGCTTGAT CCGTTACCTG
ATGCGCCACT GGCACAGCAC GCCGTTCGAG ATGTGTGAGT TGAAACTGCA CGTCAAACTG
CCCGTTTTCG TGGCCCGCCA GTGGATCCGC CACCGCACCG CCAACGTCAA CGAATACTCG
GCGCGGTATT CGATTCTGGA CCGGGAGTTC TACATCCCCC AGCCCGACCA ACTGGCCGCG
CAATCGGTGG TCAACAATCA GGGCCGGGGG GAGACTTTGC AGGGCGAGGA GGCTGAGCGC
GTTTTGCGGA TGCTCAAGGA CGATGCAGGT CGCGCGTATG ATCACTATGA GGAGATGTTA
TCGCAGGAGG GTCAGCAGGG TCTGGCGCGC GAACTGGCCC GCATGAACCT GCCCGCGAAC
GTCTACACCC AATGGTACTG GAAAGTGGAC CTGCACAACC TGTTCCACTT CCTCCGCCTG
CGGGCGGATG AGCACGCGCA GTATGAAATC CGCGTCTATG CGGACGCGAT CTGCGAGATG
GTCAAAGACT GGGTCCCGGC GGCCTATGGC GCGTTCGAGG ACTACCGGAT GGGCGGCGTC
CAGTTGTCAG GCAAGGGCGT TGAGGTGTTG AGGCGGCGTC TAGCCGGGGA AGAGGTGACG
CAGGAGACGT CTGGGATGAG CAAGGGAGAA TGGCGGGAGT TCGAGGCGGT GTTTTAA
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| Protein sequence | MWPLAARPNR FRSIRTFVMP LTPEQLEDIQ NSRANPQPTL RAVAPGMEQH LYEAKPVLDH
GFVRVIDYMG DDAAIVQAAR VSYGAGTKKA RDDSGLIRYL MRHWHSTPFE MCELKLHVKL
PVFVARQWIR HRTANVNEYS ARYSILDREF YIPQPDQLAA QSVVNNQGRG ETLQGEEAER
VLRMLKDDAG RAYDHYEEML SQEGQQGLAR ELARMNLPAN VYTQWYWKVD LHNLFHFLRL
RADEHAQYEI RVYADAICEM VKDWVPAAYG AFEDYRMGGV QLSGKGVEVL RRRLAGEEVT
QETSGMSKGE WREFEAVF
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