Gene Jann_1086 details

Gene Information

• Locus tag: Jann_1086
• ID: 3933530
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: +
• Start bp: 1050555
• End bp: 1051307
• Gene Length: 753 bp
• Protein Length: 250 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637903434
• Product: hypothetical protein
• Protein accession: YP_509028
• Protein GI: 89053577

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.0866441
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTTGAAG GTTGGGCTCT GGCCCTGGCC ACGCCCGGGC TGGAATGGGT CATCGCGGCG 
GCTGTTCTGG CGGCTTTGGT CTATGGTTTC GCGGGCTTCG GCTCGGCCCT GATTTTCATG 
CCGCTTTCCA CCATCTTCCT GCCGCCGCCG CTGGCGATTG CGGCGTTCTC CCTCTCGGCC 
GTCGGGTCCC TGCTCACCGT GTTCCCCGGG GCCTGGAAAG CGGCGGACAA GACGCAAACG 
CTGATGGTGG TGGCGATGTC CATCGTCTTC ATGCCCGTGG GCATCTACCT GCTGCGCATC 
GCGCCCGAGG TGACGATCCG CACCGCCGTG TGCGTCATGA CCCTTCTGAC CCTGGCACTT 
TTGCTGTCGG GATGGAAAGT TCCGCTGCGG GGCGGGCGCG GCCTGCAACT GGGCGTGGGC 
GCGCTGGCCG GGATCACCGG CGGCTCCACC GGGCTGAACG GCCCCCCGGT CATCCTGTTC 
AATCTGGGTA CCGATCAGCC CGTGGCGGTG ACGCGCGGCA ATCTGGCGTG TTTCCTGACC 
CTGAATTCGC TGGCCATGAT GCCGATGTTG TGGATCCAGG GGTTGGTGGA TGCGCGCGCG 
TTCTTTTTGG GCCTGATCCT TTTGGGCCCC TACGCGCTTG GCGGGTTTCT GGGCGTGCAG 
ATGTTTCGGC CGGACCGCGC TCGGATCTAC AAGGCGGTGG CCTATATACT GATCGGCGTG 
GCGGGCGTCA TGGGCCTGCC CGTCTGGGGA TAG 

 

Protein sequence

MFEGWALALA TPGLEWVIAA AVLAALVYGF AGFGSALIFM PLSTIFLPPP LAIAAFSLSA 
VGSLLTVFPG AWKAADKTQT LMVVAMSIVF MPVGIYLLRI APEVTIRTAV CVMTLLTLAL 
LLSGWKVPLR GGRGLQLGVG ALAGITGGST GLNGPPVILF NLGTDQPVAV TRGNLACFLT 
LNSLAMMPML WIQGLVDARA FFLGLILLGP YALGGFLGVQ MFRPDRARIY KAVAYILIGV 
AGVMGLPVWG