| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1077 |
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| Symbol | |
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| ID | 3933521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1038768 |
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| End bp | 1040336 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903425 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_509019 |
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| Protein GI | 89053568 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.108497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTAC GCAACCTGAT GGCCATCACG CTTCTTGCCG GCTCGCTGGC GCTGCCTGCC
GCAGCCCAGG AGCGCCCGGA TCTGGTCATC GCCGTCGACA ACCTCTGGCC AACGATGGAT
CCGGTTATTG GCATTTCAAC GACCGGTGCC CGCGTGCACA CGAACATCTT TGATACCCTG
GTGCGTCGGA ACCGCTGGGA AGATCCCGAT GGCACGGAAC TCGTGCCCTG GCTTGCCGAA
AGCTGGCAGC AGCTGTCGCC GAATGTCTGG GAGTTCACGC TGCGCGACGG CGTCCCCTTC
CACGACGGCC ACATCATGGA TGCCGAAGAT GTCGCGTTCT CGTTGTCGGC AGAACGGCTC
TGGGGCGATG AACCCCTTGC CCCGCGCGGC ACCCGCTACA CGCGCGGCTT TGTGCGGGTG
GAGGCGACCG GCCCGCTGAC CGTCGAAGTG GAAACCAGCT TCCCCGATCC GAACCTGCCG
TTCCGCATGG TCACGCCCAT CGGCTTTGTC CTGCCGCAGC ATTATTATGA GGAGGTCGGA
ACAGAAGCCT TCGGGCAGAT GCCGATGGGC ACCGGCCCGT ACCGGATGAC CGCGTTTGAC
CCCTCCGTCG CCGTAGAGGC GGTGGCCTTT GACGATTACT GGGCCGGAGA GCCGCCCGCC
GCCACGCTGC GCTTCGAGAT CGTGCCCGAG TTCTCCACCC GGTTCGCGGG CCTTGTGGCG
GGCGAATATG ACGTCGTCGT CAGTGTGCCG TCCGATCAGG TCGATGTGCT CGACGGCACC
GACGGCGTGA CGGTGCTGGA GAAGGGGATC GAGAATTATC CGATGTTCGC CTTCAACATG
CTTGAGACCG ACGCGCTGCC CGACAACCCG CTGACGGATG TGAACCTGCG CCGCGCCATT
GTGGCCGGTG TGGACCGCGA CGCGATTGCA GCGGCGATCT GGGGCGACGC AACCTTCGTG
CCGACACCCT TCAACTTCCC GGAATATGGC GATTATTTCG ATCCGGACCG CGAACGCGCT
GTCCCGTTTG ATCCCGCACA GGCCGCCGAA TACCTGGCCG CCAGCGACTA TGACGGCGAA
GAGCTGATCT GGCACATCAC CCGGGGCTTC TACCCGAATT ACGAGATCGC GGCGGAGTTC
ATGGTGGAGC AATGGGCCGA GATCGGGATC AATGTGCGCA TCGAGTTGAA GGACAATTTC
TCACTCGCCT ATGAACGCCC GTTCCACTTC CTCAACATGT CGATGAGCTC CGAGTTTTCC
GGCGATCCCT ATCGCCCGCT CTGGATGGAT TGGGGCCCTC TGTCGAGCCG GTTCCGCGCC
TCGCACCGGA CCTGGGACAT GACGGAAGAG TTTGTGACCC TTGGCGAAGC GTTTGAACAG
ACACAGGATT TTGAGGGACG CTATCAGGCC TATCTGGATC TGGTCGCGGA ATGGGAACGC
GTCACGCCCG GCATGTATAT GTGGCGCAAC GTGGTCAGCT ACGCGATCAA CGAAGACCTG
CAATGGGATC CCGGCAATTC CGCCGTCACC ATCTTCGATC ACCTCTATAT GACTGGCTAT
GATGGGTGA
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| Protein sequence | MTLRNLMAIT LLAGSLALPA AAQERPDLVI AVDNLWPTMD PVIGISTTGA RVHTNIFDTL
VRRNRWEDPD GTELVPWLAE SWQQLSPNVW EFTLRDGVPF HDGHIMDAED VAFSLSAERL
WGDEPLAPRG TRYTRGFVRV EATGPLTVEV ETSFPDPNLP FRMVTPIGFV LPQHYYEEVG
TEAFGQMPMG TGPYRMTAFD PSVAVEAVAF DDYWAGEPPA ATLRFEIVPE FSTRFAGLVA
GEYDVVVSVP SDQVDVLDGT DGVTVLEKGI ENYPMFAFNM LETDALPDNP LTDVNLRRAI
VAGVDRDAIA AAIWGDATFV PTPFNFPEYG DYFDPDRERA VPFDPAQAAE YLAASDYDGE
ELIWHITRGF YPNYEIAAEF MVEQWAEIGI NVRIELKDNF SLAYERPFHF LNMSMSSEFS
GDPYRPLWMD WGPLSSRFRA SHRTWDMTEE FVTLGEAFEQ TQDFEGRYQA YLDLVAEWER
VTPGMYMWRN VVSYAINEDL QWDPGNSAVT IFDHLYMTGY DG
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