| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1066 |
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| Symbol | |
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| ID | 3933510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1025899 |
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| End bp | 1028751 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903414 |
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| Product | hemolysin-type calcium-binding protein |
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| Protein accession | YP_509008 |
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| Protein GI | 89053557 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0187032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAT ATTTCGTCAC GACATCGAAT TGGAATGATC CGTCCTTCTG GTCCTCGATC
AATCAATCGG GCGACGGCCA TTCGATCGAT TTCGGCAATC TACCCAGCAA CTTTTCGGTG
GAGTTCGACA AGGGCAGCGG TCTTGTCACG CTGTCGGACG GGACGTCGAC ATTCACGATT
GGGGATGCCA ACCATGGTGG CAGCTCGGAC GCGACCCTGG GTGGCTCCAC GCAGTGGACG
TATTTCGATA ATGTCGAGGG AAGCCAGGGC GATGACAGCT ACACCGGTGA CAACAGCGCC
GACAGATATG AAGGCCAGGC CGGCGACGAC ACAGTGCAGG GCGGTGGTGG CGACGACTAC
CTTGATGGCT GGCAGGGTGA CGACAGCATC GACGGCGAGG ACGGGGATGA CTTCATCTAC
GGCTACGACG GGAATGATAC GATCTCGGGT GGTGCGGGCA ACGATACGAT TGACGGAGAG
GACGGCGACG ACAGCATAGA CGGCGGCTCC GGCAATGACA GCCTGAGCGG AGGCGGCGGC
AACGATACGA TCCAGGGCGG CGATGGCCGC GACACCATTG ATGGCGGCTC TGGCAATGAC
AGCATTGACG GCGGTGGCGA CAGCGACACG ATCTCGGGCG GCAGCGGGGC CGACACGATC
GACGGGGGTG CGGGCGACGA CCAGATCAGC GGGGGCGACG GGGCCGACGT GATCACAGGG
GGCACCGGCG ACGACACGAT TGACGGCGGC GCAGGGGCCG ATGTGATCCA CGGCAATGAC
GGTGACGACA GTCTGGACGG CGGCACGGGC GACGACACGA TCCACGGCGG CGATGGCAGC
GATACCATCC TTTTGGGCGA TGACGGAAAT TCGGGCCGCA CGAAGGTCAA CGCCGGCGAT
AACCTTCAGG GGACCACCGG CCAGGATGCC TATGAATGGG CGGGCGGTGC GGGAAATTCC
GCCGTGATCC GGTTCAATTT GTCCGCGACT GCGGGCGACA GTGACGGCCT TGCCGATTAC
GTCGTCGTCA CCAACGCAGA TGATGCGGGC ACTTTAACGA TTGGCGATTT CGATATCGGC
ATCGACACGA TCTATATCCA GGAACCGTGG GCCAATGTCA GCAGTTCGAC AGGCGATTAC
AACGGCACGC CGTTTGAGAC CTACACGCTG ACCTACGCCG ATGGCGCGCA GCAGACCTTC
CGGATTTATC ACGATGGCTC AACGCCGCCG AATGTGGCCG ACATCTTCTC AACCGGGACG
TCACCCTCCG CGGCTGTGCC CGACGGCAAC GATAGTGTCA CGGGCGGAAG TGACGCTGAT
ACGTTCGTGG TCTCGGACGG TTTCGGCAAC GACACCGTTG AGGGCGGCAG CGGCGGCACC
GATTATGACA CCATCGACCT CTCGTCCCTG ACGGGGCCCG TCACCGTCTC CTATTCAGGA
ACCGAGGCGG GCACGATCAC CGACGGCACC AATACGATCA CCTTCTCGGA TATCGAGCAT
CTGACCCTTT CAGATCAGGC CGATGTCGTG AACGCGACCA GCGCGACCGA GAGGATTTCC
ATCGACCTAG GGGCCGGGGA TGACAGCCTC ACCGACGGGG ACGGCGACGA TTCAATTATC
GCGGGCGACG GTGACGATTT CATCATGGCC AATGATGGCA ATGATACCAT CGAAGGCGGC
GCAGGCGACG ACGATATTGA GGGCGGCGGC GGCGCGGACA GCATCGACGG CGGCGACGGC
AACGATTTCA TCGCGGGCTA CGATGTCGCG GGCCTTGCGG CCAACAGCGA GCGCGTCAAC
ACCGATGACG GCGCGAACGA TACCTTGTCG GGCGGCGCGG GCGAAGACAC GCTTCTGGGC
GGTGCGGGCG ATGATGACCT GGACGGCGGC GCGGACAACG ACACCCTGAA GGGTGGCACC
GGCAATGACA GCCTCACGGG CGGCGATGGC GATGATACCT TCGTCTATAA TGTGGGCGAT
GGCCTTGATA CGATCACCGA TTTCAATGCG GGCAACAGCG GTGATCTGGG TGACGGCGAC
CCCACGAACA ACGATTTCAT CGACCTCAGC GCCTACTACG ATTCGATCCG GGAATTGCGC
GCTGACTTTG AGGATGACGG CATCCTCAAC CAATCCAACG ACACGGGGCC GGGGGCTGCC
GATTACTCCG ACAACACGCA GATGGCTGAC GGGGAGGGGA TCGCGTTCCA GAACGCGTCC
CGCAACAGCT TCTCCGCCGA TTCCACCGGT GTGGTCTGCT TCACCCGCGG CACGGCCATC
CGCACCCCGC GCGGGGAGGT CCTGATCGAA GATCTCCGTG TCGGTGATCT GGTGGATACG
CTCGATAATG GCCCGCAACG GCTCGTCTGG ATCGGCACGC GAGAGGTCAG TGTCGCGCAG
CTGACGATCT ATCCCAACCT GCGCCCGATC CGCATTCAAC GGGGCGTCCT GGGCAACACG
CGCAAGATGC TGGTGTCGCG TCAGCACGGC ATGCTTCTGG GGCAGGATCA CTTCGCCCGC
GCCGTTCACC TGAGCAAATG CATGCGCGGC GTGGGGCTGC TGCGCCCCGA GGAGGGCGTG
ACCTACATCC ACCTGTTGTT CGAGAGCCAT CAGGTCGTCT TCGCCGAAGG AATTGCGAGC
GAGAGCTTCT ACCCCGGCCC CCAGGCATTG GCGATGATGG ACGCGGCGGG TCGCGCGGCC
CTGGCCACGC ATCTGCCGAC ACTGAACACC GACGCCCCCA CGCTTATGAA CGCCCATATC
GCCTACGGCC CGCCCGTCCG CGCGTTTCTG GCCAAGCAAG AGGTGGCGGA GTGGACGCTG
CGCGACAGGC CACAATTTGC GTTGGCGGGG TAG
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| Protein sequence | MATYFVTTSN WNDPSFWSSI NQSGDGHSID FGNLPSNFSV EFDKGSGLVT LSDGTSTFTI
GDANHGGSSD ATLGGSTQWT YFDNVEGSQG DDSYTGDNSA DRYEGQAGDD TVQGGGGDDY
LDGWQGDDSI DGEDGDDFIY GYDGNDTISG GAGNDTIDGE DGDDSIDGGS GNDSLSGGGG
NDTIQGGDGR DTIDGGSGND SIDGGGDSDT ISGGSGADTI DGGAGDDQIS GGDGADVITG
GTGDDTIDGG AGADVIHGND GDDSLDGGTG DDTIHGGDGS DTILLGDDGN SGRTKVNAGD
NLQGTTGQDA YEWAGGAGNS AVIRFNLSAT AGDSDGLADY VVVTNADDAG TLTIGDFDIG
IDTIYIQEPW ANVSSSTGDY NGTPFETYTL TYADGAQQTF RIYHDGSTPP NVADIFSTGT
SPSAAVPDGN DSVTGGSDAD TFVVSDGFGN DTVEGGSGGT DYDTIDLSSL TGPVTVSYSG
TEAGTITDGT NTITFSDIEH LTLSDQADVV NATSATERIS IDLGAGDDSL TDGDGDDSII
AGDGDDFIMA NDGNDTIEGG AGDDDIEGGG GADSIDGGDG NDFIAGYDVA GLAANSERVN
TDDGANDTLS GGAGEDTLLG GAGDDDLDGG ADNDTLKGGT GNDSLTGGDG DDTFVYNVGD
GLDTITDFNA GNSGDLGDGD PTNNDFIDLS AYYDSIRELR ADFEDDGILN QSNDTGPGAA
DYSDNTQMAD GEGIAFQNAS RNSFSADSTG VVCFTRGTAI RTPRGEVLIE DLRVGDLVDT
LDNGPQRLVW IGTREVSVAQ LTIYPNLRPI RIQRGVLGNT RKMLVSRQHG MLLGQDHFAR
AVHLSKCMRG VGLLRPEEGV TYIHLLFESH QVVFAEGIAS ESFYPGPQAL AMMDAAGRAA
LATHLPTLNT DAPTLMNAHI AYGPPVRAFL AKQEVAEWTL RDRPQFALAG
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