Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1055 |
Symbol | |
ID | 3933499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1008779 |
End bp | 1009498 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637903403 |
Product | alpha/beta hydrolase |
Protein accession | YP_508997 |
Protein GI | 89053546 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCACT GTACGCTGGC AAAGGGCGCG GCCTGGGCAG GCGTGGCGCG GCACCTTCGC GACCAACTCT CCATGGTGGC CCCCGATCTC CTGTCCCATG GGGAGGGTCC GCATCATGAC CCGGCGCGCG ATTTCCACGA TCAGGCGACG GAGGCCGCGA CAATGCATCT GCCGGAGGGT CGAAGCCACC TCATCGGCCA CTCCTTCGGG GCCACCATCG CCCTGCGTCT GGCCCTGGAC CATCCAACGC GGGTCAAGAC GCTTACCCTG ATCGAGCCGG TGCTCTTTTG TGCCGCGACC GGTCCCGGAC GCGCCGCCCA TGACGCCCAT ATTGCAGGCG TGCCACGCGC GTTGGCTGCC GGAGACACGG CACAAGCCGC CCGCATTTTT CTGGGCCTCT GGGGGGCAGA GCCCTATGAC ACCATGTCAC CCGCCCTCCA ACGCTATGTG ACGGACCGCA TCTGGATCCC GGATGCCTGC GCGCCGGCGC TTGACCACGA CCGCGCGCAG ATCCTGCCGC GCCTGATGCA ACTGCCCGCG CCCACACTGC TTGTGCAGGG CGCGGCCTCT CCGCCGGTCA TCGCGGAGAT CATGGCGCGG CTCTCCCACC TGATCCCTGT CGCACGGGGC GAAACGATCC CCGGCGCGGC CCATATGTCG CCTGTCACCC ACGCCCGTCA AACCGCCTCG GCCATCGCCG GTTTCATCGC CCAGGCCTGA
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Protein sequence | MLHCTLAKGA AWAGVARHLR DQLSMVAPDL LSHGEGPHHD PARDFHDQAT EAATMHLPEG RSHLIGHSFG ATIALRLALD HPTRVKTLTL IEPVLFCAAT GPGRAAHDAH IAGVPRALAA GDTAQAARIF LGLWGAEPYD TMSPALQRYV TDRIWIPDAC APALDHDRAQ ILPRLMQLPA PTLLVQGAAS PPVIAEIMAR LSHLIPVARG ETIPGAAHMS PVTHARQTAS AIAGFIAQA
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