Gene Jann_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1055 
Symbol 
ID3933499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1008779 
End bp1009498 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content68% 
IMG OID637903403 
Productalpha/beta hydrolase 
Protein accessionYP_508997 
Protein GI89053546 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCACT GTACGCTGGC AAAGGGCGCG GCCTGGGCAG GCGTGGCGCG GCACCTTCGC 
GACCAACTCT CCATGGTGGC CCCCGATCTC CTGTCCCATG GGGAGGGTCC GCATCATGAC
CCGGCGCGCG ATTTCCACGA TCAGGCGACG GAGGCCGCGA CAATGCATCT GCCGGAGGGT
CGAAGCCACC TCATCGGCCA CTCCTTCGGG GCCACCATCG CCCTGCGTCT GGCCCTGGAC
CATCCAACGC GGGTCAAGAC GCTTACCCTG ATCGAGCCGG TGCTCTTTTG TGCCGCGACC
GGTCCCGGAC GCGCCGCCCA TGACGCCCAT ATTGCAGGCG TGCCACGCGC GTTGGCTGCC
GGAGACACGG CACAAGCCGC CCGCATTTTT CTGGGCCTCT GGGGGGCAGA GCCCTATGAC
ACCATGTCAC CCGCCCTCCA ACGCTATGTG ACGGACCGCA TCTGGATCCC GGATGCCTGC
GCGCCGGCGC TTGACCACGA CCGCGCGCAG ATCCTGCCGC GCCTGATGCA ACTGCCCGCG
CCCACACTGC TTGTGCAGGG CGCGGCCTCT CCGCCGGTCA TCGCGGAGAT CATGGCGCGG
CTCTCCCACC TGATCCCTGT CGCACGGGGC GAAACGATCC CCGGCGCGGC CCATATGTCG
CCTGTCACCC ACGCCCGTCA AACCGCCTCG GCCATCGCCG GTTTCATCGC CCAGGCCTGA
 
Protein sequence
MLHCTLAKGA AWAGVARHLR DQLSMVAPDL LSHGEGPHHD PARDFHDQAT EAATMHLPEG 
RSHLIGHSFG ATIALRLALD HPTRVKTLTL IEPVLFCAAT GPGRAAHDAH IAGVPRALAA
GDTAQAARIF LGLWGAEPYD TMSPALQRYV TDRIWIPDAC APALDHDRAQ ILPRLMQLPA
PTLLVQGAAS PPVIAEIMAR LSHLIPVARG ETIPGAAHMS PVTHARQTAS AIAGFIAQA