Gene Jann_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1046 
Symbol 
ID3933490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1000850 
End bp1001410 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content60% 
IMG OID637903394 
ProductATP synthase F1, delta subunit 
Protein accessionYP_508988 
Protein GI89053537 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAAC CTGCTTCAAT CTCGACCGGC ATCGCCGCGC GCTATGCGAC CGCGATGTTT 
GAGCTGGCCG AGGAGGCCAA AGCGCTTCCT GCCTTGGAAA AGGATGTCGA TGCGTTGGAC
GCGGCCTTGT CCGAGAGCGC GGATTTGCGC GATCTGATCC ACTCACCGAT CTATGGCCGC
GATGAGGCGT CCGCCGCAAT CGGCGGTGTG GCCGACGCGA TGAAGCTACA GGACATGACC
GGCAACACGC TGCGGCTGAT GGCGTCCAAG CGCCGCCTGT TCGTGCTGCC TGCGCTGCTG
TCCGAGCTGC GCGAGCGTAT CGCCGACCAC AAGGGCGAAG TAACGGCAGA GGTGACCTCG
GCCAAGGCGC TGACGAAAAC GCAACTGGAC AAGCTGACCA AGTCGCTCAA GGCGCAGGTG
GGCAAGACCG TGACCGTAAA AGAGACCGTG GATGAGAACA TCATCGGCGG TCTTATTGTT
AAAATTGGCT CGAAGATGAT CGACACCTCG GTCCGCTCCA AGCTGAACGC ACTCCAGAAT
ACCATGAAAG AGGTCGGATA A
 
Protein sequence
MSEPASISTG IAARYATAMF ELAEEAKALP ALEKDVDALD AALSESADLR DLIHSPIYGR 
DEASAAIGGV ADAMKLQDMT GNTLRLMASK RRLFVLPALL SELRERIADH KGEVTAEVTS
AKALTKTQLD KLTKSLKAQV GKTVTVKETV DENIIGGLIV KIGSKMIDTS VRSKLNALQN
TMKEVG