| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1041 |
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| Symbol | |
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| ID | 3933485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 995874 |
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| End bp | 998231 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637903389 |
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| Product | ATPase AAA-2 |
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| Protein accession | YP_508983 |
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| Protein GI | 89053532 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACGA AAGGAGCACA GATAGTGCCG TCTTTTTCGA ACACACTGGA ACAGGCCATC
CACGCCGCGC TGGCCAACGC CAACGCGCGT CGTCATGAAT TGGCGACCCT GGAACACCTG
CTTCTTGCAC TCATTGATGA GCCCGACGCA CAAAAGGTCA TGAAGGCCTG CTCGGTCGAT
ATCGAAGTGT TGCGGGACAC CCTGTCGAAG TTCATCGATG ATGATCTTTC GACACTTGAA
ACGGATGTCG AAGGATCGGA GGCTGTACCA ACGGCCGCCT TCCAGCGCGT GATCCAACGC
GCCGCCATTC ACGTTCAATC CTCGGGCCGG ACCGAAGTGA CAGGCGCCAA CGTGCTCGTC
GCCATCTTTG CGGAGCGGGA GAGCAATGCC GCCTATTTCC TGCAAGAGCA GGACATGACG
CGCTACGACG CCGTCAACTT TATCGCCCAC GGGGTCGCCA AAGACCCCAG CTATGGCGAA
GCGCGTCCCG TGACCGGGGC CGAAGACGAC GAGCAAGTCA CGCCTAACGT TCAGGACGAT
GCGGGCGGGG AGGAGAAGGA ATCCGCCCTT TCCAAATATT GCGTCGATCT GAATGCCAAG
GCGACCAAGG GGGATGTAGA TCCCCTGATC GGTCGCGCCT CGGAAGTGGA GCGGTGCATT
CAGGTCCTGT GCCGCCGCCG CAAGAACAAC CCGCTTCTGG TGGGTGATCC CGGCGTGGGC
AAAACCGCAA TCGCGGAAGG CTTGGCGAAG AAGATTGTTG AAGGCGAGAC CCCCGAGGTG
CTGGAAAATG CCACCATCTT CTCCCTCGAC ATGGGCGCGT TGCTCGCCGG CACCCGCTAT
CGCGGTGACT TCGAGGAACG CCTGAAAGCT GTCGTCAAAG AGCTGGAAGA CCATCCTGAC
GCTGTTCTAT TCATCGACGA GATCCACACC GTGATCGGTG CCGGTGCGAC GTCTGGTGGG
GCAATGGATG CCTCCAACCT GCTGAAGCCT GCGTTGCAGG GCGGCGGTCT GCGCTGCATG
GGCTCCACCA CCTACAAGGA ATTCCGCCAG CACTTCGAGA AGGACCGCGC CCTGTCGCGG
CGCTTCCAGA AGATCGATGT GGAGGAGCCT TCGGTTGATG ACGCGGTGAA AATCCTCAAG
GGCCTGAAGC CGTATTTTGA GGAGCATCAT TCGGTGAAAT ACACGGCCGA TGCGATCAAG
ACGTCGGTCG AACTGGCCTC GCGCTACATC AATGACCGCA AATTGCCCGA CAGCGCCATC
GACGTGATCG ACGAAGCCGG TGCGGCGCAG CATCTGGTGG TGGAGAGCAA ACGGCGCAAA
ACCATCGGCA CCAAAGAAGT GGAAGACGTG GTGGCCAAGA TCGCCCGCAT TCCGCCCAAA
ACCGTGTCCA AGGATGATGC GATTGTTCTG AAAGACCTGG AGGTGTCACT GAAGCGTGTC
GTCTTCGGTC AGGACAAGGC GATTGAGGCT TTGGCCTCGT CCATCAAGCT GGCCCGTGCC
GGCCTGAGGG AGCCTGAAAA GCCCATCGGC AACTACCTGT TCGCCGGTCC CACCGGTGTG
GGTAAGACCG AGGTTGCCAA GCAATTGGCA GACACCCTTG GCGTGGAACT GATCCGGTTC
GACATGTCCG AGTACATGGA AAAGCACGCG GTCTCGCGTT TGATCGGTGC CCCTCCGGGC
TATGTCGGCT TTGACCAGGG CGGTCTTCTG ACCGATGGCA TCGACCAGCA TCCCCATTGC
GTGTTGCTGC TGGATGAGAT CGAGAAGGCG CACCCGGATG TCTTCAACAT CCTGTTGCAG
GTCATGGACC ACGGCACTCT GACGGATCAT AACGGACGCT CCGTCGACTT CCGGAACGTG
GTTTTGATCA TGACCTCCAA CGCAGGTGCG GCGGAGCAAG CGAAGGCAGC CATCGGCTTC
AACCGTGACC GTCGGGAGGG TGAGGATACG GCCGCGATCG AGCGGACCTT CACACCGGAA
TTCCGCAACC GGCTGGATGC GGTGATCTCC TTCGGGCCGC TCCCGAAAGA GGTGATCCTG
CAGGTGGTCG AGAAGTTCGT GCTTCAGCTG GAAGCGCAAC TGATGGACCG CAACGTCACG
ATCGAGCTCA CCAAGCCCGC AGCCGAATGG CTGGCTGACA AAGGATATGA CGACCGCATG
GGCGCACGGC CACTGGGTCG CGTGATCCAG GAACATATCA AAAAGCCCCT CGCGGAGGAG
CTGTTGTTCG GGAAACTGGC CAAAGGTGGC AACGTCCAGG TCGGAGTGAA AGACGGCAAA
ATCGATCTGC GCGTGGAGGA GGCGGGAAGC CCGCGCCTCT CTCCCAAGAA GAAGCCGCCG
CTTCTGACCG CAGACTGA
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| Protein sequence | MQTKGAQIVP SFSNTLEQAI HAALANANAR RHELATLEHL LLALIDEPDA QKVMKACSVD
IEVLRDTLSK FIDDDLSTLE TDVEGSEAVP TAAFQRVIQR AAIHVQSSGR TEVTGANVLV
AIFAERESNA AYFLQEQDMT RYDAVNFIAH GVAKDPSYGE ARPVTGAEDD EQVTPNVQDD
AGGEEKESAL SKYCVDLNAK ATKGDVDPLI GRASEVERCI QVLCRRRKNN PLLVGDPGVG
KTAIAEGLAK KIVEGETPEV LENATIFSLD MGALLAGTRY RGDFEERLKA VVKELEDHPD
AVLFIDEIHT VIGAGATSGG AMDASNLLKP ALQGGGLRCM GSTTYKEFRQ HFEKDRALSR
RFQKIDVEEP SVDDAVKILK GLKPYFEEHH SVKYTADAIK TSVELASRYI NDRKLPDSAI
DVIDEAGAAQ HLVVESKRRK TIGTKEVEDV VAKIARIPPK TVSKDDAIVL KDLEVSLKRV
VFGQDKAIEA LASSIKLARA GLREPEKPIG NYLFAGPTGV GKTEVAKQLA DTLGVELIRF
DMSEYMEKHA VSRLIGAPPG YVGFDQGGLL TDGIDQHPHC VLLLDEIEKA HPDVFNILLQ
VMDHGTLTDH NGRSVDFRNV VLIMTSNAGA AEQAKAAIGF NRDRREGEDT AAIERTFTPE
FRNRLDAVIS FGPLPKEVIL QVVEKFVLQL EAQLMDRNVT IELTKPAAEW LADKGYDDRM
GARPLGRVIQ EHIKKPLAEE LLFGKLAKGG NVQVGVKDGK IDLRVEEAGS PRLSPKKKPP
LLTAD
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