| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1033 |
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| Symbol | |
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| ID | 3933477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 984955 |
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| End bp | 987153 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903381 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_508975 |
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| Protein GI | 89053524 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCCA TGATTGAGCA TTTTGATGAA GGCGATTTGG TTGGGGTTCT GACGGCAGAG
CCCCTGGACC GCGTGCTTGA TTACAAAGCG CCCGCAGGGG GGTGCTGGTT AGGCGCGTTT
GTGGAAGTGC CGCTGGGTCC GCGCAAAGTT CTGGGCGTGG TCTGGGGGCC GGGGCGGGGC
GATTGGGACA TTGCCAAGGT TCGGTCTGTC AACCGGGTGC TGGACGTGGC CCCGATGCGG
GCCGAGATGC GGAAGTTTCT GGAAAAAGCG GGGGCTTACA CGCTGACGCC CATGTCGCTG
ATGCTGCGTC TGGCCACGCG GGTGCCGGGC CTGAGCGATC CGCCGTCGAT GCGCAAGGTC
TACCGTCTGG GGCAGGGCAC GCCGGACCGG GTGACGCCCG CGCGCACCCG GGTGATCGAG
GCGTTGGTGG AATATGGTGG CCTCGCCTTC ACGTTGAAGG AGTTGAGCGA ACTGGCCGGC
GTCACATCGA CGGTCGTGAA GGGTCTTGCC AAGCAGGGCG TGGTGGAAGA GGCGGACACG
CCCCGCGATG CCCCCTACCT GACGCTCGAC CCCGGCCTGC CCGGCAAGGA ATTGACCGAG
GATCAGGAGA TTGCCGCCGA TCGTTTGCAG GAGGGATCGC GCGCCCGGCG CTATGGGGCG
GTTCTGCTGA AAGGTGTGAC CGGGTCCGGC AAGACGGAAG TGTATCTGGA GGCGGTCGCG
GAATGCCTGC GTCAGGGGCG TCAGGCGCTT GTACTGTTGC CGGAAATCGC GCTGACCTCT
GAATTCCTGA CCCGCGTGAA GGCACGCTTC GGGGCCGATC CGGCGGAGTG GCATTCCGGC
GTCACCATGA CCGAACGCCG CCGCTGCTGG CGCATGGTCG GGCAGGGGGA GGCACAGTTG
GTCGTCGGCG CGCGATCCGC GCTGTTTCTG CCCTACCGGG ACCTTGGGTT GATCGTCGTG
GATGAGGAAC ACGACACTTC CTACAAGCAG GACGAAGGGG CCAGCTACAA CGCTCGCGAT
ATGGCCGTTC TGCGCGCGTC CCTGAACGAG GCGCAGGTGG TTTTGGCGTC TGCCACGCCG
TCGTTGGAGA CGTGGTCCAA CGCGCAGGCG GGCAAATACA CGCGCCTTGA TCTGGTGTCC
CGGTTCGGGC CCCAGGATCT GCCGGATATG GCATCCATCG ACATGCGGTT GGAAGATCTG
CCGGGGGGCT CCTGGCTGTC ACCTTCGCTG ACATCCGCCG TAGGGGCGCG GTTGCAGGCG
GGTGAACAGG CATTGTTGTT CCTGAACCGT CGTGGCTACG CGCCCGTTAC CCTGTGTCGC
GCCTGCGGAG AGATGGTGGG CTGCGACCAT TGTGACGCGC GCATGGTGGA ACATCGGTTC
CAGAAACGCC TGATCTGCCA CCAATGCGGC GAGACCAAAC CCCTGCCGGA GGTCTGCCCC
TCCTGCGGGG CGGAGGGCAA GATGGCCGCG GTCGGCCCGG GTGTGGAGCG GATCGCGGAA
GAAGCCGCCG CCGCCTTTCC CGATGCGAAA TTGGCGATCC TGTCGTCCGA CCTGTTCGGC
TCGGCCCGGG CGTTGAAAGC GCAGATTGAG GAACTGGCGA ACGGCGATAC CGACCTGATC
ATCGGCACGC AATTGGTGGC CAAAGGGCAC AACTTCCCGC GCCTGACGCT GGTGGGTGTC
GTGGATGCGG ATTTGGGCCT GCAAGGATCA GATTTGCGCG CGGCAGAGCG GACGTTCCAG
CTGATGCGGC AGGTGGCGGG GCGGGCCGGT CGTGCCGACA AGCCGGGCCA AGCGCTGTTG
CAGACGTTCC AGCCCGAACA TCCGGTGATC CGCGCAATCC TGTCGGGCGA TGAAGAGGGG
TTCTGGCGTA CGGAAGCAGC GGAGCGGGAG GCGGCTGGCA TGCCGCCCTA TGGTCGTCTC
GCGGGGATAA TTATCTCCAG CACGGAAGCC GCCGCTGCCT TCGACCTCGG CACGCATCTG
GCCCGCAACG ATGGCCCGAT CCGTGAGGCG GGCGGTATCG TCTATGGCCC GGCCCCAGCC
CCCATCGCCC GTGTGCGCGG CAGGCACCGG GTGCGACTTC TGGTCAAGGC CCCAAAGGGT
GTCGCGCTGC AACCGGCCCT AAGCCGTTGG ACCCACGGGC TAAAACTGCC CGGCCATCTG
CGACTTGCCA TAGATATCGA CCCGCAGAAC TTCTTCTGA
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| Protein sequence | MDPMIEHFDE GDLVGVLTAE PLDRVLDYKA PAGGCWLGAF VEVPLGPRKV LGVVWGPGRG
DWDIAKVRSV NRVLDVAPMR AEMRKFLEKA GAYTLTPMSL MLRLATRVPG LSDPPSMRKV
YRLGQGTPDR VTPARTRVIE ALVEYGGLAF TLKELSELAG VTSTVVKGLA KQGVVEEADT
PRDAPYLTLD PGLPGKELTE DQEIAADRLQ EGSRARRYGA VLLKGVTGSG KTEVYLEAVA
ECLRQGRQAL VLLPEIALTS EFLTRVKARF GADPAEWHSG VTMTERRRCW RMVGQGEAQL
VVGARSALFL PYRDLGLIVV DEEHDTSYKQ DEGASYNARD MAVLRASLNE AQVVLASATP
SLETWSNAQA GKYTRLDLVS RFGPQDLPDM ASIDMRLEDL PGGSWLSPSL TSAVGARLQA
GEQALLFLNR RGYAPVTLCR ACGEMVGCDH CDARMVEHRF QKRLICHQCG ETKPLPEVCP
SCGAEGKMAA VGPGVERIAE EAAAAFPDAK LAILSSDLFG SARALKAQIE ELANGDTDLI
IGTQLVAKGH NFPRLTLVGV VDADLGLQGS DLRAAERTFQ LMRQVAGRAG RADKPGQALL
QTFQPEHPVI RAILSGDEEG FWRTEAAERE AAGMPPYGRL AGIIISSTEA AAAFDLGTHL
ARNDGPIREA GGIVYGPAPA PIARVRGRHR VRLLVKAPKG VALQPALSRW THGLKLPGHL
RLAIDIDPQN FF
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