Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1030 |
Symbol | xerC |
ID | 3933474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 982398 |
End bp | 983321 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637903378 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_508972 |
Protein GI | 89053521 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTCG CGCTGACCCC GGCGGTGCGT GATCTGTTGG CGGGCTGGCT GACCCACCTG CGCGGTGTGC GCGGGCGGGC GGAAGCCACG CTGACGGCTT ATGGCGCGGA TGTGGGCGAA TTCCTTGCAT TCCAGGCGGA CCATTTGGGT GGCTCCCCCG GCCCTGCCGC GTTGCGGACG CTGCAAACCC GTGACCTGCG CGCGTGGATG TCGTCGCAAC GGGCGCGGGA TGTGGGCGCG CGGTCCTTGG CGCGCCGCCT CTCTGCCGTG AAGGCCTTCT ACAATTGGTG GGCCGAACGC GATGGCTTCG ACGCCACTGC CGTTTTGTCC ATGCGTGCGC CCAAACACAC CCGCCGCCTG CCCCGCCCCC TGACAGAAGT GGGCGCGAAA GACATGATCG CAGGGCTTGC CGATCAGGAC GACCGCGATT GGGTGCAGGC CAGGGACATG GCCGTCGTCA CATTGCTCTA CGGCTGCGGA TTGCGGATAT CGGAAGCGCT TGGCCTCACC GCCGATCTGC TGCCCCTGCC CGGCATTCTG CGCATCACCG GCAAAGGCGG GAAGGAGCGG GAGGTTCCTG TTCTGCCCGC AGCCCAAGAC GCCTGCGCAC GATACGCCCA ACTCTGCCCC CACGACCTTG CCCCGGGAAC CCCGCTGTTT CGGGCGATCC GGGGCGGCGC GCTCGGCCCC CGCGCGGTCG CCAAGGTGAT GGAGAAAACT CGTCTACAAC TTGGCCTGCC CGCGACCGCC ACCCCCCACG CGATGCGGCA TTCCTTTGCC ACGCACCTTC TGGACGCGGG CGGCGATCTG CGCGCCATTC AGGAGCTTTT GGGCCACGCG TCCCTTTCCA CCACCCAGGC CTATACCGCC GTCGATACCG CCCGCCTGAT GGAAGTCTAC GCGAACGCGC ACCCCAAGGC CTGA
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Protein sequence | MSLALTPAVR DLLAGWLTHL RGVRGRAEAT LTAYGADVGE FLAFQADHLG GSPGPAALRT LQTRDLRAWM SSQRARDVGA RSLARRLSAV KAFYNWWAER DGFDATAVLS MRAPKHTRRL PRPLTEVGAK DMIAGLADQD DRDWVQARDM AVVTLLYGCG LRISEALGLT ADLLPLPGIL RITGKGGKER EVPVLPAAQD ACARYAQLCP HDLAPGTPLF RAIRGGALGP RAVAKVMEKT RLQLGLPATA TPHAMRHSFA THLLDAGGDL RAIQELLGHA SLSTTQAYTA VDTARLMEVY ANAHPKA
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