| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1027 |
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| Symbol | |
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| ID | 3933471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 979757 |
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| End bp | 980665 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903375 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_508969 |
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| Protein GI | 89053518 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.851404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATCG AGTTTCGGCA CCTGCGCACG ATCAAGGCCA TCCACGAGGA GGGGGGATTG
GCGAAGGCAG CGGCAAGCCT GCACATCACG CAGAGCGCGT TGAGCCACCA GATCAAAGGG
TTGGAGGATC AGGCGGGATT GGAGCTGTTC ATCCGACGCT CCAAACCGAT GCGGCTGTCA
CCGGCGGGGA TGAAAATGCT GCGCCTGGCC GATGAGGTCC TTCCAAGGGT CGCTGCGCTG
GAGGAAGATT TCACCGGTCT GCGCGCGGGA AAATCCGGGC GGCTGCACAT CGCCATTGAG
TGCCACGCCT GTTTCGATTG GCTGCTGCCG GTGCTGGAGG CGTTCCGGAA GACGTGGCCG
GATGTAGATG TGGATATCCG CCCCGGCCTG CAATTCGAGG CTTTGCCCGC GCTGAACCGT
CAGGACGTGG ATCTGGTGAT CTCCAGCGAT CCTGAGGATC TGCCGGGCGT CGATTTCACG
CCCCTGTTCG ATTATGAGCC CGTGTTTGTC TGCGCCGCGG ACCATCCGCT GGCGGCGAGA
CCCTATATCG AAGCCGGGGA TTTTGCCGAC CAGACCCTGA TTACTTACCC GGTGGATCGC
CCCCGGCTTG ACGTGTTCAG CCAGCTTCTG TTCCCGGCGG GCGTGGAGCC GAAGGCGATC
CGACAGGTGG AACTATCTGC GGTGATCCTG CTGCTGGTGG CCTCGGGGCG GGGTGTGTCG
GTGTTGCCCG ATTGGGTGGT GCGCGATGTG GGCGCAAGCC AGTCCATCGT GACGAAATCC
CTGACGCAGG CGGGGCTGAC GCGCAGGTTG TATGGGGCCA GCCGGTCCGA GGATACGGCG
AAACCCTTCA TGTCCCATGT CCTGAAACTG AGCCGGTCCG AGCCCCTGAA ACTGCAACGC
CGGGCCTAG
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| Protein sequence | MHIEFRHLRT IKAIHEEGGL AKAAASLHIT QSALSHQIKG LEDQAGLELF IRRSKPMRLS
PAGMKMLRLA DEVLPRVAAL EEDFTGLRAG KSGRLHIAIE CHACFDWLLP VLEAFRKTWP
DVDVDIRPGL QFEALPALNR QDVDLVISSD PEDLPGVDFT PLFDYEPVFV CAADHPLAAR
PYIEAGDFAD QTLITYPVDR PRLDVFSQLL FPAGVEPKAI RQVELSAVIL LLVASGRGVS
VLPDWVVRDV GASQSIVTKS LTQAGLTRRL YGASRSEDTA KPFMSHVLKL SRSEPLKLQR
RA
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