| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1015 |
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| Symbol | rimO |
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| ID | 3933459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 968162 |
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| End bp | 969538 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903363 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_508957 |
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| Protein GI | 89053506 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.158544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA ACCCACCCCT CCTCCGCCCC GATCTCGCAC GGGCCCGCGT GCCTGATGAC
GCCCGCCCCG GCCAGCCCCG CATCGGCATG GTGTCACTTG GCTGCCCGAA AGCGCTGGTC
GATAGCGAAC GCATCCTCAC CCGCCTGCGC GCGGAGGGCT ATGCGATCAG CCCCGATTAT
ACCGGCGCGG AGGCGGTGAT CGTGAACACC TGCGGCTTTC TCGACAGTGC CAAGCTGGAA
AGTCTGGAGG CGATTGGCGA GGCGTTGGAG GCGAATGGCA AGGTCATCGT GACAGGCTGT
CTGGGTGCGG AGCCTGAGTA TATCACCGGC GCGCATCCCA CGGTTCTGGC CGTCACCGGA
CCGCAGCAAT ATGAGCAAGT GCTTGATGCT GTCCATGGGG CCGTGCCCCC CGCGCCCGAC
CCGTTCATCG ACCTTTTGCC ACCCGCAGGC GTCAAGCTGA CACCCCGCCA TTACGCCTAT
CTCAAGATCG CCGAGGGCTG CGATCACAAG TGCAAGTTCT GCATCATCCC CGACATGCGC
GGCAAGCTTG TGTCCCGCCC CCAGACCGCC GTGATGCGAG AGGCCGAGAA GTTGGTGGAC
AGTGGCGTTA AGGAATTGCT GATCATCTCC CAGGACACGT CTGCTTACGG TGTGGACTGG
AAGGACCGGA ACAAAGCCGG TGATGAGAAG TTTCCTATCC TCAATCTATC CCGCGACTTA
TCCACTCTGG GTGCCTGGGT TCGCTTACAC TACGTCTACC CCTATCCCCA TGTGCGCGAA
TTGATCCCCT TGATGGCGGA TCCCGCGAAC GGCCTGCTGC CCTACCTCGA CATTCCGTTT
CAGCATGCCC ATCCCGATGT CCTCAAGCGC ATGGCACGGC CCGCCGCTGC GTCCCGGACT
CTGGATGAGA TCGCCGCCTG GCGACGCGAC TGCCCGAACA TCACCCTGCG CTCCACCTTC
ATAGTCGGCT ACCCCGGCGA GACGGAGGCG GAGTTCCAAA CCCTGCTCGA TTGGCTGGAC
GAGGCGCAGC TCGACCGCAT CGGATGTTTT CAATACGAAA ACGTCGACGG CGCGCGCTCC
AACGCCCTGC CGGATCATGT TGCGCCGGAG GTCAAGCAGG ACCGCTGGGA CCGGTTCATG
GAAAAGGCAC AAGCCATTTC AGAGGCGAAG CTGCAAGCCA AGGTGGGCCG CACGATGCAG
GTCCTTGTGG ACAGCGTGGA CGAGGAGGGC GCCACCTGTC GCACCGTGGC AGACGCACCT
GAGATCGACG GCAACCTCTT CATCGACGAG GGGTTTGACG GCCTGACACC CGGTGACTTG
GTGACGGTCG AGGTTGACGA GGCCAGCGAG TACGACCTCT GGGGCAAGCT GACTTAG
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| Protein sequence | MSQNPPLLRP DLARARVPDD ARPGQPRIGM VSLGCPKALV DSERILTRLR AEGYAISPDY
TGAEAVIVNT CGFLDSAKLE SLEAIGEALE ANGKVIVTGC LGAEPEYITG AHPTVLAVTG
PQQYEQVLDA VHGAVPPAPD PFIDLLPPAG VKLTPRHYAY LKIAEGCDHK CKFCIIPDMR
GKLVSRPQTA VMREAEKLVD SGVKELLIIS QDTSAYGVDW KDRNKAGDEK FPILNLSRDL
STLGAWVRLH YVYPYPHVRE LIPLMADPAN GLLPYLDIPF QHAHPDVLKR MARPAAASRT
LDEIAAWRRD CPNITLRSTF IVGYPGETEA EFQTLLDWLD EAQLDRIGCF QYENVDGARS
NALPDHVAPE VKQDRWDRFM EKAQAISEAK LQAKVGRTMQ VLVDSVDEEG ATCRTVADAP
EIDGNLFIDE GFDGLTPGDL VTVEVDEASE YDLWGKLT
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