Gene Jann_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1003 
Symbol 
ID3933447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp960689 
End bp960970 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content66% 
IMG OID637903351 
Producthypothetical protein 
Protein accessionYP_508945 
Protein GI89053494 
COG category[R] General function prediction only 
COG ID[COG2388] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.709962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.531715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATA TCGAACGCCA CGTCTCGGAC ACCAAGGGGC GCTATGTGCT GACCCGCGAT 
GGGGTCGAGG CCGAGCTGAC CTACTCGATC ATGTCGCCCC AACGGATCAT CGCCGACCAC
ACCGGTGTGC CGGACGCGTT GCGCGGCTCC GGCGCGGGGC GGGAGTTGGT GGAACGCCTT
GTCGCCGATG CCCGGGCCGA AGGGGTCACG ATCATAGCCC TTTGCCCCTT CGTCCGCGCG
CAAGCAAGCC GTCACCCGGA ATGGGCCGAC GTCTTTTCCT AG
 
Protein sequence
MSDIERHVSD TKGRYVLTRD GVEAELTYSI MSPQRIIADH TGVPDALRGS GAGRELVERL 
VADARAEGVT IIALCPFVRA QASRHPEWAD VFS