| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0998 |
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| Symbol | |
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| ID | 3933442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 957232 |
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| End bp | 958056 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903346 |
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| Product | Flp pilus assembly CpaB |
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| Protein accession | YP_508940 |
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| Protein GI | 89053489 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0394807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.82555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCG TTTTCATTCT AGTCCTGGCC GTCGGCGTTG GCTTGGCCGG TTTTGCGGTC
TCAATTGCCA AAGACCGCTT TGACCAATAC CAAACAGCAC TGGCCGAGCA GCGCGACGCC
ATCCTTCCAA CCGTGGAATT GATTGTCGTC AGCCGTCAGC TGCGTTACGG CGAACAGATC
ACGCCCGATG ACGTCCAGCT GATCCGCTGG CCTGCCGAAC ACGTCCCTTT TGGCGCTTTC
ACCACCATGG ATGAGCTTTT CCCACCAGAC GAAGAAGGGG CGCGTACCGT TCTTCGGATG
ATGGAACAGG ATGAGCCGAT CCTTCTGGTC AAGGTCACCG CGCCGGGTGA GGATGCGGGC
GTTGCATCTC GCCTCGAAGC TGGCATGCGC GCCATTGCGC TGCGGGTCGA CGTCAACTCC
GGCGTGTCTG GCTTCCTGCG TCCCGGCGAC CGTGTAGACG TCTACTGGAC CGGCCCCGGC
CGCAACGGCG ACACCGTCAC ACGATTGATC CGCGCCAATG TGCAGTTGAT TGCGATCGAC
CAGATTGCAG ACGAACAGCG CAACAGCCCG ACAATTGCCC GCACCATTAC TGTCACGGCC
CGCCCCGAAG ATGTGGCCGC CCTGACCCAG GCCCAAGGCT CCGGTTCCTT GACCTTGGCG
CTGGTCGGTG TGGGTGACGA AACCGAGCAG GGAGAAGTGG AAGTCTCGAC CTCCGCCCTC
CTTGGAGAGA TCGAGGAAGT GGCCGTCGAC GGGCCTCGGG TCTGCACAGT TCGCAACCGC
CGCGGTGCGG AAGTGGTCAT CACACAGGTG CCCTGCCTAA ACTGA
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| Protein sequence | MRIVFILVLA VGVGLAGFAV SIAKDRFDQY QTALAEQRDA ILPTVELIVV SRQLRYGEQI
TPDDVQLIRW PAEHVPFGAF TTMDELFPPD EEGARTVLRM MEQDEPILLV KVTAPGEDAG
VASRLEAGMR AIALRVDVNS GVSGFLRPGD RVDVYWTGPG RNGDTVTRLI RANVQLIAID
QIADEQRNSP TIARTITVTA RPEDVAALTQ AQGSGSLTLA LVGVGDETEQ GEVEVSTSAL
LGEIEEVAVD GPRVCTVRNR RGAEVVITQV PCLN
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