| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0987 |
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| Symbol | |
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| ID | 3933431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 944460 |
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| End bp | 946313 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903335 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_508929 |
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| Protein GI | 89053478 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.076567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGTC GTCGCGATAG GCTTGTCTCA ATATATGGCC TTCAGTTCCA CATAGTGGGA
CTCAATCTTG CACAGGAACC GCCCATGTCC GACACGCGCG CAAATCGCCG TTACCGCAGC
CAGGAGTGGT TCGACAATCC CAACAATCCG GGCATGACCG CGCTTTACCT GGAACGCTAT
CAAAATCAGG CGTTCACCAG AGCCGAGTTG CAGGCCGAAA AGCCCATCGT CGGCATCGCG
CAGACGGGCA GCGATCTGGT GCCGTGCAAC AAGATCCACG TTTTCCTGAT GGACCGGATC
AAAGCTGGCA TTCGCGATGC GGGCGGCATC CCGTTGGAAT TCCCGGTGCA CCCTATCCAG
GAAACGGGCA AACGGCCCAC GGCCGCCCTG GACAGAAACC TGCAATATCT ATCGTTGGTC
GAAGTGTTGC ACGGCTATCC GCTGGACGGC GTGGTGCTGA CGACCGGCTG CGACAAGACC
ACGCCTGCGA TGCTGATGGG GGCTGCGACC GTCGATTTGC CCGCGATTGC GCTGAATGGC
GGGCCGATGC TGGACGGGTG GTTTCGCGGC AAACGCGCGG GGTCCGGTAC GTCGATCTGG
GAGGGACGGC GGCTGCTGGC GAAAGGCGAG ATCGACTATG AAGAGTTCAT GGAATTGGCC
TGCGCGTCCT CGCCAAGCCT GGGGCATTGC AACACGATGG GCACGGCGTC GACGATGAAC
GCCTTGGCCG AAGCGCTTGG CATGACACTG CCCGGCGCGG CGGCGATCCC TGCTCCTTTT
CGGGAGCGGA TGGAGATGGC CTACCTGACA GGAAAACGCG CCGTGGAGAT GGTGGAGGAC
GATCTGAAAC CGTCCGACAT CCTGACACGG GCGGCGTTCG AGAATGCGAT AAAGGTGAAC
ACCGCGATTG GCGGCTCAAC CAATGCGCCC CCGCATTTGC AGGCATTGGC GCGCCATGCG
GGCGTCGAAT TGCATGTGAC GGACTGGGAA AAGATCGGTC TTGCGCTGCC GTTGTTGGTG
AACATGCAGC CAGCAGGCGA GTATCTGGGC GAGTCGTTTT TCCGCGCGGG CGGGGTCCCG
GCGGTGATGG GAGAGTTGCA CGCGGCAGGT CTGTTGGACG GGTCGGTGAT GACCGCGTCC
GGAAAGGTTC TGGACGAGGC CCTGGGCGGC GCGCGCAGCC GGGACCGCCT GGTCATTCGC
CCGGTGGACG ACCCAATGCG GGAAGAGGCG GGGTTTGCGG TGCTGTCAGG CAACCTTTTT
GACAGCGCAT TGATGAAAAC CTCGGTGATA TCGGAGGATT TCCGTGAGCG ATTTCTGAAA
GATAATCAGT ATGAAGGCCG GGCTATCGTG TTTGAAGGCC CCGAGGACTA CCATGATCGA
GTCAATGATC CGGATCTGGC CATCGATGAT GAGTGCATCC TGTTCATCCG CGGCGTGGGC
TGCGTTGGGT ATCCGGGCTC GGCTGAGGTT GTGAACATGC AACCGCCCGA CGCGCTGATC
AAAGGCGGCA TCAAACACCT GCCGACGGTG GGCGACGGGC GGCAATCGGG CACGTCTGAG
TCGCCGTCGA TCCTGAACGC CTCGCCTGAA TCGGTCGTTG GCGGCGGGCT GGCGTATCTG
GAAACCGGTG ACCGGGTGCG GCTGGATCTG AATGCCGGGA CGTTGAACGC CTTGGTGCCA
GAGCAGGATT GGGAGGCGCG GAAGGCCAAC TGGACCGCAT CGGAGATCCA CCACCAGACC
CCTTGGCAGG AATTGTACCG CCAGCATGTG GGCCAATTGG CCGATGGGGG GTGCCTCGAA
CTGGCGACCG CCTATCAGCG GATCGCCAAG CACCTGCCGC GCGACAACCA TTGA
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| Protein sequence | MTGRRDRLVS IYGLQFHIVG LNLAQEPPMS DTRANRRYRS QEWFDNPNNP GMTALYLERY
QNQAFTRAEL QAEKPIVGIA QTGSDLVPCN KIHVFLMDRI KAGIRDAGGI PLEFPVHPIQ
ETGKRPTAAL DRNLQYLSLV EVLHGYPLDG VVLTTGCDKT TPAMLMGAAT VDLPAIALNG
GPMLDGWFRG KRAGSGTSIW EGRRLLAKGE IDYEEFMELA CASSPSLGHC NTMGTASTMN
ALAEALGMTL PGAAAIPAPF RERMEMAYLT GKRAVEMVED DLKPSDILTR AAFENAIKVN
TAIGGSTNAP PHLQALARHA GVELHVTDWE KIGLALPLLV NMQPAGEYLG ESFFRAGGVP
AVMGELHAAG LLDGSVMTAS GKVLDEALGG ARSRDRLVIR PVDDPMREEA GFAVLSGNLF
DSALMKTSVI SEDFRERFLK DNQYEGRAIV FEGPEDYHDR VNDPDLAIDD ECILFIRGVG
CVGYPGSAEV VNMQPPDALI KGGIKHLPTV GDGRQSGTSE SPSILNASPE SVVGGGLAYL
ETGDRVRLDL NAGTLNALVP EQDWEARKAN WTASEIHHQT PWQELYRQHV GQLADGGCLE
LATAYQRIAK HLPRDNH
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