| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0986 |
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| Symbol | |
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| ID | 3933430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 941928 |
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| End bp | 944351 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903334 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_508928 |
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| Protein GI | 89053477 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.26181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCCG CCCTCCCCCC TCAGATTGAG CGCTGGTTTA CCGCCCGAGG GTGGTCGATC
CATCCCCATC AACGCGAGAT GCTCGCGCTG GCCGATCAGC CCTGTCAGCT GTTGATCGCA
CCCACGGGTG GCGGCAAAAC CATGGCCGGG TTTTTGCCCA CTTTGGCGGA ATTGGCGGAT
GGCACACACG ATGGGCTGCA TACGCTTTAC ATCAGTCCTC TCAAGGCCTT AGCCGCCGAT
ATCAAGCGAA ACCTCATTGG TCCGGTGGAT GAAATGGGCC TGCCCATCCG TATTGAGGAC
CGCACCGGCG ACACCCCTTC CAGCCGGAAG CGCCGCCAAC GCGCAGATCC CCCACATATT
CTTCTGACGA CGCCTGAAAG CCTGGCCTTG CTCACCTCCT ACGAGGACGC GGCGCGCACG
TTCAAAGGGC TCCAGCGGGT GATTGTCGAT GAAATTCATG CGCTTAGCGA GTCCAAGCGC
GGCGATCAGC TGATGCTCGC GCTGTCTCGC CTGTCAACGC TCGCGCCCGG CCTCCGGCGC
GTGGGGCTGT CAGCGACGGT CGAAGATCCG GACGCCATCG CCCGCATCCT TGCCCGCAAC
CCTGATCCCT GCGCAATCCT TCAGGCCGAT CCCGGCCCCG ACCCCGACAT TTCAATGCTG
ACCACAGACG CCCCACCGCC CTGGTCCGGG GGCGGCGGGA AATACGCGAT GGAGGCCGTG
CTGGAGCAAG TAAAGGCCCA TAATACCACG TTAATTTTTC ATAACACCCG CGCCCAGGCC
GAGATCTTCT TTCATCACCT TTGGCTATCC AACGAGGATG AGATCCCCAT CGGCATCCAC
CACGGTGCGT TGTCACGGGA ACAACGCGAA CGGGTCGAAC AGGCTATGGT CGCGGGCGAC
CTGAAGGCCA TCGTTTGCAC CGGTAGTCTC GATCTCGGCA TCGATTGGGG CGACGTGGAT
CTGGTGATCC AGGTGGGCGC ACCCAAGAAC GTCAAGCGGT TGGTGCAGCG GATAGGGCGC
GCCAATCACC GCTATAACGC GCCCTCTAAG GCTTTGATTG TGCCCGCCAA TCGGTTTGAA
GTCATCGAGT GTATCGCCGC GCTTCAGGCC GTCCGGGACC ACACATTGGA CGGTGACACC
GACCATACCG GCCCTTTGGA TGTGCTTTGC CAGCATATCC TGATCCGCGC CTGCGCCGGA
CCGTTTACGG GTGATGATCT CTACGCCGAG GTCACAACCG CAGGCGCGTA TACCCACCTG
CCGCGCGAGA TGTTCGAGCG TTGCGTGGAT TTCGTGGCCA CCGGCGGCTA TGCCCTGCGC
GCCTATGATC AATGGCAGCG GCTTGTCCAA AACGGGGACG AATACCGCCT GCGCGATCCG
CGTGCCACCA CCCGCATTCG CATGAATATC GGCACCATCG TCGACGCAGA TAAGATGCCC
GTGAGGATGC AAAAAACCCG TGGGGGCAAG CCTTTAGGGG AAGTGGAGGA ATACTTCGCC
TCCACCCTGC GCAAAGGCGA TACGTTCCTT ATCGGCGGAA AAATCGTCCG CTATGAGGGG
ATGCGCGAAA TGACGGTAGA GGTCTCCCGC AGCTCCACCC AGAAGCCCAA GATCGCGACG
TTCATGGGCA CGAAATTCGC CACCTCGACA CAGCTGAGCG ACCGCATTCT GACCATGTTT
CGCCAGGATG ACTGGCCCGA ACTGCCCGAT CACACACGCG ACTGGCTGCA CCTGCATCGC
AAGGTCTCGC AGCTGCCTGA GAAGGATCGC CTGTTGGTCG AGACCTTCCC GCACGACGGG
CGGCAGCACT TGGTGGCCTA CGGCTTTGCG GGCCGAAACG CGCAACAGAC ATTGGGTCTG
CTGCTGACGC ACAGGATGGA AACCGAACGC CTCAACCCGA TGGGCTTCGT GGCCACCGAC
TATGCGACCA TGGTCTGGGG GCTTGATGAA GTCACTGATC CCAAACCGCT TTTCAGCCAC
GAGACCCTTC TGGCGACGAT GGAGACCTGG CTGGCAGACA ACGCGGTGAT GAAGCGGACG
TTCAAGAGCA GCGCGATCAT CGCGGGCCTT GTGGACCGGT CCATGCCCGG CGGCAAACGC
AAGACGGGGC GCCAGGCCAC GTTCTCAACC GATATCCTGT ATGACACTCT GCGCAAGTAT
GACCCGGATC ATGTGATGAT GGAGATCACG CGGCAGGAGG CGATGCGCGG CCTTGTGGAT
TTCGGCCGGA TTGAAGGCAT GTTGGACCGG ATCGGCGACC GTATAGACCA CCGCCCCCTC
CCCCGCGTCA GCCCCCTGGC CGCACCCCTG TTTCTGGAAG CCGGGCGCGT TCCCGTTCAA
GGACTCGCCA ATGAGCGCTT GCTGGAAGAG GAAACGCAGC GCCTGATGGA GACGGCGGGC
CTGTCATTCG GACCCGCGCA ATGA
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| Protein sequence | MTPALPPQIE RWFTARGWSI HPHQREMLAL ADQPCQLLIA PTGGGKTMAG FLPTLAELAD
GTHDGLHTLY ISPLKALAAD IKRNLIGPVD EMGLPIRIED RTGDTPSSRK RRQRADPPHI
LLTTPESLAL LTSYEDAART FKGLQRVIVD EIHALSESKR GDQLMLALSR LSTLAPGLRR
VGLSATVEDP DAIARILARN PDPCAILQAD PGPDPDISML TTDAPPPWSG GGGKYAMEAV
LEQVKAHNTT LIFHNTRAQA EIFFHHLWLS NEDEIPIGIH HGALSREQRE RVEQAMVAGD
LKAIVCTGSL DLGIDWGDVD LVIQVGAPKN VKRLVQRIGR ANHRYNAPSK ALIVPANRFE
VIECIAALQA VRDHTLDGDT DHTGPLDVLC QHILIRACAG PFTGDDLYAE VTTAGAYTHL
PREMFERCVD FVATGGYALR AYDQWQRLVQ NGDEYRLRDP RATTRIRMNI GTIVDADKMP
VRMQKTRGGK PLGEVEEYFA STLRKGDTFL IGGKIVRYEG MREMTVEVSR SSTQKPKIAT
FMGTKFATST QLSDRILTMF RQDDWPELPD HTRDWLHLHR KVSQLPEKDR LLVETFPHDG
RQHLVAYGFA GRNAQQTLGL LLTHRMETER LNPMGFVATD YATMVWGLDE VTDPKPLFSH
ETLLATMETW LADNAVMKRT FKSSAIIAGL VDRSMPGGKR KTGRQATFST DILYDTLRKY
DPDHVMMEIT RQEAMRGLVD FGRIEGMLDR IGDRIDHRPL PRVSPLAAPL FLEAGRVPVQ
GLANERLLEE ETQRLMETAG LSFGPAQ
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