| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0975 |
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| Symbol | tolB |
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| ID | 3933419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 930772 |
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| End bp | 932109 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903323 |
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| Product | translocation protein TolB |
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| Protein accession | YP_508917 |
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| Protein GI | 89053466 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0670772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAACC GCCGCAATTT CATTCGCACA ACCTCGGCCC TTGCGGCCTC CACCGCATTG
CCGGGATACG CGTTCGGGCA ATCGGGCCCG TTGCGGTTGG AGATCACCGA AGGTGTGATC
GAGCCGTTGC CCTTCGCCTT GCCGACCTTT CTGGCGGTGG GCGGAGCCGA AGATGCAGCC
GCCGATGTCA GCCGCGTGAT CGCAGCGGAT CTGCGGGGCA CCGGCCTGTT CCGCCAGATC
CCCCCGGATG CCTACATCAG CCAGATCACC AATTTCGGCG CCCCCGTGGC CTATCCCGAT
TGGCAGGCGA TCAACGCGCA GGCCCTGATC ACGGGTCAGG TGGAGGCCCG CGCCGATGGC
CAGCTGGTCG TCCGGTTCCG CTTGTTCGAC GTGTTCAGCC AAGCGCCCCT GGGCGAGGGC
CTGCAATTTG TCGGTCCGGC GGATAGCTGG CGGCGCATGG CCCACACCGT CGCCGATCAG
GTCTACAGCC GGATCACCGG GGAGGGCGGC TATTTCGACA CCCGCGTCGC CTTCATCGCC
GAGGAAGGGC CCAAGAACGC GCGTCTCAAA CGGCTTGCGA TCATGGATTA CGATGGCGCG
AATGTGCAGT TCCTGACGGA CAGTCGGTCC ATCGTATTGG CCCCGCGCTT CTCGCCCCAA
GGCGACAGGA TCCTTTACAC CAGTTACGAG AGTGGCTTTC CACAGGTCTA CATCATGGAT
GTGGCGACCG TGCAGCGCCG CCCGCTGGAG GCGATCCCGG CAGAGACGAT GACCTTTTCG
CCGCGCTTCA GCCCCTCGGG GCAATCGGTG GTGTTCAGCC TCGTGGATGG GTCGAACACC
GATATCTATT CGCTGGATCT GGCGACGGGC ACACGGCGAC AACTGACCCA GGCCCCGTCG
ATCGAGACGG CCCCGTCGTT CAGTCCGGAC GGCAGCCAGA TCGTGTTTGA AAGCGACCGC
TCCGGCAACC AACAGATCTA TATCATGCCA GCGGATGGCG GCGAGGCGCG GCGTGTTTCA
GCCGGGACGG GGCGCTATGG CACGCCGGTC TGGTCGCCGC GTGGCGACTA CATCGCGTTC
ACCAAGCAGG AAAACGGGCG CTTCCACATT GGCGTGATGC GCACCGACGG GTCAGATGAA
CGGCTTCTGA CGTCCTCGTT CCTGGATGAA GGCCCGACCT GGGCGCCCAA TGGACGCGTG
ATCATGTTCA CCCGCGAAAC ACCGGGCGAT GACGGGGCTC CGGCCGTCTA CTCCGTCGAT
ATCTCGGGCC GGAACCTGCA ACGGGTCGCG ACACCGGGCA TGGCGTCGGA CCCCGCGTGG
TCGCCCTTAC AGAGTTGA
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| Protein sequence | MLNRRNFIRT TSALAASTAL PGYAFGQSGP LRLEITEGVI EPLPFALPTF LAVGGAEDAA
ADVSRVIAAD LRGTGLFRQI PPDAYISQIT NFGAPVAYPD WQAINAQALI TGQVEARADG
QLVVRFRLFD VFSQAPLGEG LQFVGPADSW RRMAHTVADQ VYSRITGEGG YFDTRVAFIA
EEGPKNARLK RLAIMDYDGA NVQFLTDSRS IVLAPRFSPQ GDRILYTSYE SGFPQVYIMD
VATVQRRPLE AIPAETMTFS PRFSPSGQSV VFSLVDGSNT DIYSLDLATG TRRQLTQAPS
IETAPSFSPD GSQIVFESDR SGNQQIYIMP ADGGEARRVS AGTGRYGTPV WSPRGDYIAF
TKQENGRFHI GVMRTDGSDE RLLTSSFLDE GPTWAPNGRV IMFTRETPGD DGAPAVYSVD
ISGRNLQRVA TPGMASDPAW SPLQS
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