| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0974 |
|---|
| Symbol | |
|---|
| ID | 3933418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 929424 |
|---|
| End bp | 930725 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637903322 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_508916 |
|---|
| Protein GI | 89053465 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0162438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGGT TTGCCCTTCT TTTCAGCGTT TTGGCCGCTC CTGCGGTGGC CCAGACCGCC
CCCGATGATC GACCGGGGCG CTGGATCGCC GCCCCCGCGC CGCAGGGGGA TGTGTTGCAG
GCACCGGCCT CGGGGCCGCT GATCACAACC GAACCCGCGC CGCATATCGT CCTGACGCCG
CCCGAGCCCG CCTCGGTCAT GGTTGCGCCT GCCGCAGCGC CCGACACGCA ACCCGTGCCC
CGCCCCGACG CGACGGCCAT TGCCGAGCCA GTCCCCGCGC AGGTCGTTGC AGAGCTGCAG
ACGGATCCCG TTTTGGCCGA TCGTGCTCTC GTGGACCCCC CTTTGGTGGA TCCCGCTTTG
ATCGCCCGGA TTGAGGCTAT CGTGTCGGAC GAGGTCCTCG ATCCCCAAGC CGAAGCACCC
CATTCAGGCG GGGCTGCGCA GCCGCCCGAC GTGCCCCCGA TGCTCACCGT CGCGTTCAGG
CCATCTGCGC CGTCGGATCT GCCTGTTCGG GCGACAGAAG ACCTCCTGCC AGCGCCCCCG
CCTGACAGCG GACGGGACGC GCAGCCTGTC CCACAGCCCG TTGCTGTCCT GATGCCGCCC
CTTGAAACAA CGCCGATCCT GCCGCGCCTG AGCCCGTCTG GCCCCGCCGC GCAGGACATT
GTCACCACAT TCCCCCCGTC GCAGGCCGCG CGTCTTTCGG CGGTGCTGCT GCCGTCGCCC
GTGACGCCGA CTGCGCCGCC GTTACACTTG GCCCGCGCCC CCGCGCCGGT TCGGGACCCG
TTCCCGATGT CCGCCCTGCC GCCCTCCGCG CTGCCGGAGG GTCCAGATAC CCTCGGGCGC
TTGATCCAAC CTTTGCGTCC GTTGCCGGAA GCCAATGCGG CGGTGCTGAT CGGGCAACCT
TCGGTGATCC CAGCGCGTCT GCCCGTCCCG ACCCCATCCT TCACCCCATC CGCTGACCGT
CCCGCCCTGG ACCCCGAGGC CCCAATCATT TTGCCTGAGC CCGATGCCCG CGCATTGGCG
CGGATGATGG AGGATGCGAT GATCTGCTGG CGCATGGCCG ATCTTGATAC GGAAGCGGGA
TGGGCGCGGT TGTCCGTGGA TGTGGCGTTG GATGAAACCA ATCGACCCTC CGCCGCCTCG
ATCCGGTTGA CGGGCTTTGC TCATACCGTC TCGGGCGCGG CGGAAAGCGC CTACCGTGCC
GCCCATGCGG CGCTGACCGG TTGTGCGGAG GCGACGGAAA GCGCGCCCGC CACCGCATCG
GCCACTCTTG TTTTTGATCG CAGTGGGGTG CGTTTGCAAT GA
|
|---|
| Protein sequence | MIRFALLFSV LAAPAVAQTA PDDRPGRWIA APAPQGDVLQ APASGPLITT EPAPHIVLTP
PEPASVMVAP AAAPDTQPVP RPDATAIAEP VPAQVVAELQ TDPVLADRAL VDPPLVDPAL
IARIEAIVSD EVLDPQAEAP HSGGAAQPPD VPPMLTVAFR PSAPSDLPVR ATEDLLPAPP
PDSGRDAQPV PQPVAVLMPP LETTPILPRL SPSGPAAQDI VTTFPPSQAA RLSAVLLPSP
VTPTAPPLHL ARAPAPVRDP FPMSALPPSA LPEGPDTLGR LIQPLRPLPE ANAAVLIGQP
SVIPARLPVP TPSFTPSADR PALDPEAPII LPEPDARALA RMMEDAMICW RMADLDTEAG
WARLSVDVAL DETNRPSAAS IRLTGFAHTV SGAAESAYRA AHAALTGCAE ATESAPATAS
ATLVFDRSGV RLQ
|
|---|
| |