| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0971 |
|---|
| Symbol | |
|---|
| ID | 3933415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 927313 |
|---|
| End bp | 927726 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637903319 |
|---|
| Product | biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_508913 |
|---|
| Protein GI | 89053462 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02801] TolR protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGA TCAACGTCAC GCCCTTCGTG GATGTGATGC TGTGTTTGCT GATCATTTTC
ATGGTCGCGG CCCCGCTGAT GACTGTGGGT GTCCCGATTG ACCTGCCCGA TACCTCTGCC
GAGGCGTTGC CCTCCGAGCA GGAGGAGCCG CTGACCGTGA CGCTGGCCGC CGATGGCCGC
GTGATGTTGC AGACAACTGA GATTGCCCGC GACGAAATTG TGCCGCGCCT GCAGGCGATT
GCGGCGGAAC GTGACAGCCC GCGCATCTTC GTGCGCGCCG ATGGTGGCAT TCCCTACAGC
GACGTGATGG AGGTTATGGG CGCGCTGAAT GCGGGCGGGT TCCGCGAGAT TGGTCTGGTG
ACGGATGCGG GTGGCCCCCG TTTGAACGGC ACCTCCGTTG GGGAAGGGGA GTGA
|
|---|
| Protein sequence | MAEINVTPFV DVMLCLLIIF MVAAPLMTVG VPIDLPDTSA EALPSEQEEP LTVTLAADGR
VMLQTTEIAR DEIVPRLQAI AAERDSPRIF VRADGGIPYS DVMEVMGALN AGGFREIGLV
TDAGGPRLNG TSVGEGE
|
|---|
| |