| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0964 |
|---|
| Symbol | ruvC |
|---|
| ID | 3933408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 921748 |
|---|
| End bp | 922323 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637903312 |
|---|
| Product | Holliday junction resolvase |
|---|
| Protein accession | YP_508906 |
|---|
| Protein GI | 89053455 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
|---|
| TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCGT TTCGTGCTAA CCGCTCCAAA AGGCCGGGCA ACAGGCGGCC AGACATCAGG
CGGCGGGCAG TCATGCGTAT TATTGGAATC GATCCGGGGC TCAGATCCCT TGGGTGGGGG
GTGATTGAGG CCTCCGGCGG ACGTCTCAGC CATGTTGCCA ATGGCCAATG CAAGACCGAG
GGCCGGGATG TCCCCTTGCG TCTGCTGTCG CTTCACACAC AACTCAGCGC GATTGTCGCC
CGCTACGCCC CGGATGCGGC GGCGGTGGAA CAGACCTTTG TGAACCGGGA CGGGGCCGGG
ACCCTGAAGC TGGGTCAGGC CCGCGGCATC GCCGTTTTGG TGCCTGCGCA GGCGGGGCTC
GACGTGGGCG AATACGCCCC CAATGCGGTC AAGAAGGCGG TTGTCGGCGT CGGACACGCG
GACAAGACAC AGGTGGAGCA TATGGTGAAG CTGCAATTGC CCGGATGTGC CCCCGTGGGA
CCGGACGCCG CCGATGCGCT GGCGATTGCG ATCTGTCACT CGTTCCATGT GGCCACCGCC
GGACGTCTGG CCGCCGCCAT CGGAGCGGCG CGATGA
|
|---|
| Protein sequence | MFAFRANRSK RPGNRRPDIR RRAVMRIIGI DPGLRSLGWG VIEASGGRLS HVANGQCKTE
GRDVPLRLLS LHTQLSAIVA RYAPDAAAVE QTFVNRDGAG TLKLGQARGI AVLVPAQAGL
DVGEYAPNAV KKAVVGVGHA DKTQVEHMVK LQLPGCAPVG PDAADALAIA ICHSFHVATA
GRLAAAIGAA R
|
|---|
| |