Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0958 |
Symbol | |
ID | 3933402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 917435 |
End bp | 918682 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637903306 |
Product | major facilitator transporter |
Protein accession | YP_508900 |
Protein GI | 89053449 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTTG GCGACTCCCT CAGAACACTG ACGCTTGACG AAGGGCGGGC ACTGCCGCTG TGGCGCAGGC CCGTGGCGCT TCTGGCGGTG ATGTCGTTTG CGATGCCCAT CGCCTTTGCG ACCTGGGCCG CGCTTCTCAA CAACTTTGTG GTCGAGGTTG CGGCGTTTGA CGGGGCCGAT ATCGGCTGGC TGCACACGGT TCGCGAAATC CCCGGCTTTC TGGCCATCGG GGTGATCTTC CTGATCATCT TCATCCGCGA GCAGGTCCTC GGTATCATCT CCCTCGTCCT TTTGGGATGT GCGACGGCGA TGACGGCGCA GTTCCCATCG CTGGGAGGTC TGCTGTTCGT GACGCTGCTC AGCTCCATCG GGTTCCACTA TTATGAGACG GTCAACCAAT CGCTGCAATT GCAATGGATC GACAAGAAAC GCGCCCCGCA AACCCTGGGG TGGTTGATGA GCGTGGGCTC GGGCGCGACG CTGCTGACCT ATCTGCTGAT CGTGGTGACA TGGCGGACGT ATGATTTGAG CTACGATTTC GTCTACTGGA TTTCGGGCGG GGTGACGGCG GTTTTGGCTG TGATCTCCCT GCTGCTGTAC CCACAGTTTG AATCGCCCAC ACCGCAGACC AAGAAGATGG TGCTGCGCCG CCGCTACTGG CTCTATTACG CGCTGCAATT CATGTCCGGC GCGCGGCGGC AGATTTTCAT GGTCTTCGCG GGCTTCATGA TGGTGGAGCG CTACGGGTTC GAGGTGCACC AGATCACCGC GCTTTATATG GTCACGCTGC TGGCCAACAT GATCGTGGCC CCGTTTCTGG GCGGCCTTGT GGGCCGGTTC GGAGAGCGGC TGGCGCTGAT CATCGAATAT ACGGGGCTGG CGATGATTTT CGTCCTGTAT GCGGGCCTTT ACGTCTTTGA CTGGGGCGCG GGGCTGGCGG CTGGCCTCTA TATCGCGAAC CACATTTTCT TTGCGCTGGC CCTGGCGATC AAAACCTATT TCCAGAAAAT CGCCTCCCCT GAGGATATTG CGCCGACGGC CGCCGTGGCG TTCACGATCA ACCACATCGC GGCGGTGTTC CTGCCGGCGG GGCTTGGCTA TCTGTGGCTG TCGTCACCGA CCTCCGTCTT CATCGCGGCG GCAGGGATGG CGATGGTGTC GCTGGGGCTG TCGTTTCTGG TGCCCCGCCA CCCGGCCCCG GGGCATGAGA CGACGCGCCC CAACCTGAAT GCGCACCCGG CAGAGTAG
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Protein sequence | MALGDSLRTL TLDEGRALPL WRRPVALLAV MSFAMPIAFA TWAALLNNFV VEVAAFDGAD IGWLHTVREI PGFLAIGVIF LIIFIREQVL GIISLVLLGC ATAMTAQFPS LGGLLFVTLL SSIGFHYYET VNQSLQLQWI DKKRAPQTLG WLMSVGSGAT LLTYLLIVVT WRTYDLSYDF VYWISGGVTA VLAVISLLLY PQFESPTPQT KKMVLRRRYW LYYALQFMSG ARRQIFMVFA GFMMVERYGF EVHQITALYM VTLLANMIVA PFLGGLVGRF GERLALIIEY TGLAMIFVLY AGLYVFDWGA GLAAGLYIAN HIFFALALAI KTYFQKIASP EDIAPTAAVA FTINHIAAVF LPAGLGYLWL SSPTSVFIAA AGMAMVSLGL SFLVPRHPAP GHETTRPNLN AHPAE
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