Gene Jann_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0958 
Symbol 
ID3933402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp917435 
End bp918682 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content61% 
IMG OID637903306 
Productmajor facilitator transporter 
Protein accessionYP_508900 
Protein GI89053449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTTG GCGACTCCCT CAGAACACTG ACGCTTGACG AAGGGCGGGC ACTGCCGCTG 
TGGCGCAGGC CCGTGGCGCT TCTGGCGGTG ATGTCGTTTG CGATGCCCAT CGCCTTTGCG
ACCTGGGCCG CGCTTCTCAA CAACTTTGTG GTCGAGGTTG CGGCGTTTGA CGGGGCCGAT
ATCGGCTGGC TGCACACGGT TCGCGAAATC CCCGGCTTTC TGGCCATCGG GGTGATCTTC
CTGATCATCT TCATCCGCGA GCAGGTCCTC GGTATCATCT CCCTCGTCCT TTTGGGATGT
GCGACGGCGA TGACGGCGCA GTTCCCATCG CTGGGAGGTC TGCTGTTCGT GACGCTGCTC
AGCTCCATCG GGTTCCACTA TTATGAGACG GTCAACCAAT CGCTGCAATT GCAATGGATC
GACAAGAAAC GCGCCCCGCA AACCCTGGGG TGGTTGATGA GCGTGGGCTC GGGCGCGACG
CTGCTGACCT ATCTGCTGAT CGTGGTGACA TGGCGGACGT ATGATTTGAG CTACGATTTC
GTCTACTGGA TTTCGGGCGG GGTGACGGCG GTTTTGGCTG TGATCTCCCT GCTGCTGTAC
CCACAGTTTG AATCGCCCAC ACCGCAGACC AAGAAGATGG TGCTGCGCCG CCGCTACTGG
CTCTATTACG CGCTGCAATT CATGTCCGGC GCGCGGCGGC AGATTTTCAT GGTCTTCGCG
GGCTTCATGA TGGTGGAGCG CTACGGGTTC GAGGTGCACC AGATCACCGC GCTTTATATG
GTCACGCTGC TGGCCAACAT GATCGTGGCC CCGTTTCTGG GCGGCCTTGT GGGCCGGTTC
GGAGAGCGGC TGGCGCTGAT CATCGAATAT ACGGGGCTGG CGATGATTTT CGTCCTGTAT
GCGGGCCTTT ACGTCTTTGA CTGGGGCGCG GGGCTGGCGG CTGGCCTCTA TATCGCGAAC
CACATTTTCT TTGCGCTGGC CCTGGCGATC AAAACCTATT TCCAGAAAAT CGCCTCCCCT
GAGGATATTG CGCCGACGGC CGCCGTGGCG TTCACGATCA ACCACATCGC GGCGGTGTTC
CTGCCGGCGG GGCTTGGCTA TCTGTGGCTG TCGTCACCGA CCTCCGTCTT CATCGCGGCG
GCAGGGATGG CGATGGTGTC GCTGGGGCTG TCGTTTCTGG TGCCCCGCCA CCCGGCCCCG
GGGCATGAGA CGACGCGCCC CAACCTGAAT GCGCACCCGG CAGAGTAG
 
Protein sequence
MALGDSLRTL TLDEGRALPL WRRPVALLAV MSFAMPIAFA TWAALLNNFV VEVAAFDGAD 
IGWLHTVREI PGFLAIGVIF LIIFIREQVL GIISLVLLGC ATAMTAQFPS LGGLLFVTLL
SSIGFHYYET VNQSLQLQWI DKKRAPQTLG WLMSVGSGAT LLTYLLIVVT WRTYDLSYDF
VYWISGGVTA VLAVISLLLY PQFESPTPQT KKMVLRRRYW LYYALQFMSG ARRQIFMVFA
GFMMVERYGF EVHQITALYM VTLLANMIVA PFLGGLVGRF GERLALIIEY TGLAMIFVLY
AGLYVFDWGA GLAAGLYIAN HIFFALALAI KTYFQKIASP EDIAPTAAVA FTINHIAAVF
LPAGLGYLWL SSPTSVFIAA AGMAMVSLGL SFLVPRHPAP GHETTRPNLN AHPAE