| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0943 |
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| Symbol | |
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| ID | 3933387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 901015 |
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| End bp | 902238 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637903291 |
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| Product | major facilitator transporter |
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| Protein accession | YP_508885 |
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| Protein GI | 89053434 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGC CGAGCATCCT TGATACACGC GCGTCCTGGG GCCGTCTGGC GCTGGCGCTT
CTGGTGTCGC TCATCGGCAA TGCGGGGATG TGGGCGATCA TCCTGATCCT GCCCGATGTC
CAGGCGGAAT TCGGCGTCAG CCGGGCGGGC GCCTCGCTGC CCTATGCCGC GATGATGATC
GGCTTTGCCC TCGGCAATTT CCTGATCGGG CGGTGGGTGG ACCGGTATGG GCTGGCCGTG
TCACTCGCGG CATCGGCCGT GGTGATGGGT GTGGCTTACG GGGCGGCGTC CGCGGCCCCC
TCCCTCGCGG TGCTGTCGCT CGCGCAGTTT TTCATCGGTT TCGGGGCGGC GGCCAGTTTC
GGGCCATTGA TTGCCGATGT GTCCCAATGG TTCCTGAAAC GTCGGGGGCT TGCCGTGGCG
ATCGCGGCGT CCGGCAATTA CCTGTCCGGC GCGCTTTGGC CGATGCTGCT GGCTGGGACG
CTGGCCACCG ATGGGTGGCG CATGGCCTGC GTGATCCTGG CCCTAAGTTG CCTGATCGCG
ATGTTGCCCC TGACCTGGGT GCTGCGCCGT CGCCTGCCTG AAAGCGCCAT GGCCGCGTCT
GATGCGGCGG CTGTGGCCCG CGCGCGGACC ACCGGCCTCG GCCCGCGGGC CCTGACGGCG
CTGTTGGGGG TGGCGGGGAT TGGCTGCTGC GTGGCCATGT CGATGCCCCA GGTTCATATC
GTGGCCTATT GCGTCGACCT CGGATACGGC CCGGCGGTGG GGGCAGAGAT GCTGTCGCTG
ATGCTGCTGT TCGGCGTGGT ATCGCGGTTG ATTTCCGGCG TGATGGCGGA TCACCTTGGC
GGCGTGGCGA CGCTGCTGAT CGGCTCAACG CTGCAAATGC TGGCGCTGTT TCTCTACCTG
CCCGCGTCCG GCCTGACATC TTTGTACCTC GTGTCCATGG TCTTTGGTCT CAGCCAGGGG
GGCATCGTGC CATCCTATGC GGTCATCGTG CGCGAGTACC TTCCGGCGCG GGAGGCCGGG
GCGCGGGTGG GGTTCGTGAT CACGACGACG ATTGTCGGCA TGGCTTTGGG CGGTTGGCTG
TCGGGTGTGA TCTACGACGT GACGGGATCG TACCAATGGG CGTTCCTCAA CGGGATTGCG
TTCAATGCGG TGAACGTGGG CGTCATGGTC TACATCCTGC TGCGATCCCG CCCGCGCGCG
CCTTTTGTGC CAGCGCCCGC GTAG
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| Protein sequence | MSEPSILDTR ASWGRLALAL LVSLIGNAGM WAIILILPDV QAEFGVSRAG ASLPYAAMMI
GFALGNFLIG RWVDRYGLAV SLAASAVVMG VAYGAASAAP SLAVLSLAQF FIGFGAAASF
GPLIADVSQW FLKRRGLAVA IAASGNYLSG ALWPMLLAGT LATDGWRMAC VILALSCLIA
MLPLTWVLRR RLPESAMAAS DAAAVARART TGLGPRALTA LLGVAGIGCC VAMSMPQVHI
VAYCVDLGYG PAVGAEMLSL MLLFGVVSRL ISGVMADHLG GVATLLIGST LQMLALFLYL
PASGLTSLYL VSMVFGLSQG GIVPSYAVIV REYLPAREAG ARVGFVITTT IVGMALGGWL
SGVIYDVTGS YQWAFLNGIA FNAVNVGVMV YILLRSRPRA PFVPAPA
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