| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0930 |
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| Symbol | |
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| ID | 3933374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 885995 |
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| End bp | 886918 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903278 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_508872 |
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| Protein GI | 89053421 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.774145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCG ACCCTGTCAC CCTGATCGTT GCGCTTGTCA CAATCTCTAC GCCCGTGCTG
CTCGCCGCGC TCGGCGAATT GATTGTAGAG AAATCCGGCG TCCTGAACCT GGGCGTCGAA
GGTATGATGA TCATGGGCGC GGTCTGCGGC TACATCATCG CGAATCAGAC CGGCTCACCC
ACGCTGGCAT TTGTGGCGGG CATGGCGGGC GGCGCGGCGC TGTCGGTGAT TTTTGCCGTC
CTCACGCAAT TCCTGATGTC CAATCAGGTG GCCACCGGTC TGGCGCTCAC CCTCTTCGGT
CTCGGCCTCG CCGCGCTTTT GGGCGTCGGA TATGAGGGCC AGCCGATCCC CGACGTTGCC
AAACCCCTGC CCGAAGCCCT GCGCGAGTGG CCCGTCATCG GCCCCATTCT GCTCAGCCAT
GATCTTGTCA CCTACCTCGC CATCGCCGCG GTTTTCGTCA TCGCCTATGT CCTCAAGCAC
ACCCGCATGG GTCTGATCAT CCGGGCTGTC GGGGAAAGCC ATGATGCCGC CCATGCGCTT
GGCTACAAGG TGATCCGCAT CCGCTGTCTG GCGATAATCT TCGGCGGCGC CATGGCGGGC
CTTGGTGGCG CGTTCCTTTC CATCGTCTAC GTAGAGAACT GGGTGCAGGG CATGACGGCG
GGCGCAGGCT GGATCGCGCT GGCGCTGGTG GTCTTTGCCG CGTGGAAATC CGGGCGGGTC
CTGTTCGGCG CCTGGCTCTT TGGCGGGATC GCGGCGCTCC AGTTGCGCCT GCAAGCGGCA
GAGGTTCCGG TCCCCGTGGC CCTTCTGGAT GCCTCGCCGT ATCTGGTGAC GATCATCGTG
CTGGTCGTCA TGTCCTCGGA CCGCGCCAAA GCTGCGATCA ATGCGCCCGC CGCCCTTGGC
AAGACCTTCC ACGCAAGCGG GTGA
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| Protein sequence | MIIDPVTLIV ALVTISTPVL LAALGELIVE KSGVLNLGVE GMMIMGAVCG YIIANQTGSP
TLAFVAGMAG GAALSVIFAV LTQFLMSNQV ATGLALTLFG LGLAALLGVG YEGQPIPDVA
KPLPEALREW PVIGPILLSH DLVTYLAIAA VFVIAYVLKH TRMGLIIRAV GESHDAAHAL
GYKVIRIRCL AIIFGGAMAG LGGAFLSIVY VENWVQGMTA GAGWIALALV VFAAWKSGRV
LFGAWLFGGI AALQLRLQAA EVPVPVALLD ASPYLVTIIV LVVMSSDRAK AAINAPAALG
KTFHASG
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