Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0922 |
Symbol | |
ID | 3933366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 878465 |
End bp | 880258 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637903270 |
Product | cyclic nucleotide-binding domain-containing protein |
Protein accession | YP_508864 |
Protein GI | 89053413 |
COG category | [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGCG ATTTTGCGCC CGAAGGCCTG TTCAAAATTC TGCAAGGCCC CGCATTCGCG CGGCTGTCCC AGACGCCCGT GGAACGGGGC CACAAGATGA TCACCGCAGG CTCAGACGCC GAGGCGATGT ATCTGGTCTT CTCGGGCCGC TTCCGGGTGG AGCGGGACGG CGTGGATCTG GCCGAAATCG GCGCAGGCTC GGTGATCGGA GAGATCGCCT TTCTAACAGG CTCCCCCCGC ACGGCAGACG TCGTCGCCGC CCGTGACAGC ATCGTCTACC GCATTGATCG GCCCGCCTAC GATGCGCTCT GCGCCGAGGT TGACGGCCTG CCGCAAGCCA TGGCCGCAGA ACTGGCCGAC CGTCTGGCCA AAACATCCGC CCGCGTCACG CCTGATCCGG GCCGCCCGCC AGCGCGCACC TTCTGCATCC TGCCCGCTGC GGGTGCTCCC CTGCCCGAGC GGTTCGTGCC CGACCTTACC CGCGCGATAG AGGCGCATCA TTCCGTCGCT CTCGTGACCG AGGCCGCCTT CCGGGAGGCT CTGGGGGAGC GTGCCGATCC CACCACCTCA GACGCCATCG CCTGGCTCAA CACCCAGGAA CAAAACGCGC AAATCGTTCT ATTCGTCGCC AATCCCGACG CCAGCGACTG GTCCCGGGCC GCGCTGAAAC AAGCCGATCA GGCCGTGATC GTGGCCCAAG CCGTGAACTA TCAGGACCCG TCCGAGCTGG AGGCCTTCGC CCTGCAAATC CTGCCGGAGC AGCAACGTCG CCTTGTCCTG TTGCACCCCC ATCGGATGCA AAAGGCGCCA GGCACCGGGC GATGGCTCGA TACCCGGCCG GTGTTCCTGC ACCATCACGT GGCGCTGACG GGCGGTGATG GCGACATCGC GCGTTTGGGC CGGTTCCTGT CGGGCCGCGC CGTGGGACTT GTGCTGTCCG GTGGCGGTGC CTTCGGCGTG GCCCATGTGG GCGTCTACCG TGCGATGAAT GAGATGGGGC TACCCGTCGA TATCGTCGGC GGCACCTCCG TGGGCTCTGC CATGGGCGGC GCGATTGCGT TGGGTGTTCC GGCTGAGGAA ATCGGCCCCA GGGTGGAGCA GATCTTCGTC CGTTCCGGCG CGATGCGCAA AATCACCGTG CCACGGTTTG CCTTCCTCGA TCACAAAGTG CTTGATGGCG CATTGATGGA GCATTTCGGC GAAGAGCCGA TCGAAGATCT GTGGATCCCC TACTATGCCG TCGCAGCAGA CCTGTCCGCG ATGGACAAAA CCGTGATCCG GCGTGGTCCG TTGTGGGAAG CGATCCGCGC CTCGTCTGCC ATTCCCGGCG TCCTGCCTCC CTTCTTTGCG CGCGATGGGC GGATGCTTGT GGATGGGGGC TGTATCGACA ACATGCCGTT CCGCACGATG CATGGGCTGA AAACCGGCCC CAACGTCGTG GTCAATGTCC AAAAGGCCAC CAACAAGATC GTTCATGTGG ATTACGCGAG CCTGCCCGGT CGCGGAGAGC TGTTGCGCCA GACGATCAAC CCCTTCGCCA AGACGCCGCC GCGCGTTCCG GGTGTCATTT CGACGGTGAT GCGCTCACTT TTGGTGGGCC AGTCCGAGAT GCTTGCCGAT CTCGCTCCCC ACGATCTGAT GATCCGGCCC CCCGGCCTGA AAGGCGCGGG CTTTCTCGCC TGGAACCAGC ACAAGCTGTT CTACGAGATG GCCTACAAAC ATGCGCTTGG GGTCTTTGCG GAGAAGGGCA ACGACAGCGA TACCGCCATG GCTGCCCTTC GCTCAATAGT GTAG
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Protein sequence | MQSDFAPEGL FKILQGPAFA RLSQTPVERG HKMITAGSDA EAMYLVFSGR FRVERDGVDL AEIGAGSVIG EIAFLTGSPR TADVVAARDS IVYRIDRPAY DALCAEVDGL PQAMAAELAD RLAKTSARVT PDPGRPPART FCILPAAGAP LPERFVPDLT RAIEAHHSVA LVTEAAFREA LGERADPTTS DAIAWLNTQE QNAQIVLFVA NPDASDWSRA ALKQADQAVI VAQAVNYQDP SELEAFALQI LPEQQRRLVL LHPHRMQKAP GTGRWLDTRP VFLHHHVALT GGDGDIARLG RFLSGRAVGL VLSGGGAFGV AHVGVYRAMN EMGLPVDIVG GTSVGSAMGG AIALGVPAEE IGPRVEQIFV RSGAMRKITV PRFAFLDHKV LDGALMEHFG EEPIEDLWIP YYAVAADLSA MDKTVIRRGP LWEAIRASSA IPGVLPPFFA RDGRMLVDGG CIDNMPFRTM HGLKTGPNVV VNVQKATNKI VHVDYASLPG RGELLRQTIN PFAKTPPRVP GVISTVMRSL LVGQSEMLAD LAPHDLMIRP PGLKGAGFLA WNQHKLFYEM AYKHALGVFA EKGNDSDTAM AALRSIV
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