Gene Jann_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0907 
Symbol 
ID3933351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp862680 
End bp863882 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content64% 
IMG OID637903255 
Productbifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 
Protein accessionYP_508849 
Protein GI89053398 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAACGG GCAAGCGGAT TTTGTTGATC ATCGGCGGCG GAATTGCGGC GTTCAAGTCA 
CTCGACCTGA TCCGCCGCCT GCGCGATCAG GGGGCCTTGG TCGTGCCGGT TCTGACCCGC
TCGGCGGAAG AGTTTGTGAC GCCCTTGTCG GTCTCGGCTT TGGCGGCGCA GAAGGTTTAC
CGCGATCTGT TTGACCTGAC CGACGAGGCG GAGATGGGGC ATATCGAATT GTCACGCGCC
GCCGATCTTG TGGTCGTGGC GCCTGCAACG GCGGATCTGA TGGCAAAGAT GGCCGCGGGG
CTGGCGAATG ATCTGGCTTC TACTCTTCTG ATGGCGACCG ATAAGCGCGT GTTGATCGCG
CCGTCGATGA ATGTGCGGAT GTGGGAGCAT CCGGCGACCC GGCGCAATCT GGCGGTGTTG
CAGGGGGACG GCGTTTTGGT CGTGGGTCCG GATGAGGGCA ACATGGCGTG CGGAGAATAC
GGACCGGGCC GCATGGCTGA CGTGCCGGAG ATTATCGAGG CCGTGGGGGC TGCGCTTGGG
GACGGGTCAA TGAAAGACCG CCACGTGATT GTGACGTCCG GTCCCACCCA CGAGCCGATT
GATCCGGTGC GCTATATTGC CAACCGGTCT TCGGGCGCGC AGGGGGGCGC GATGGCCGCG
GCGCTGCGCG ATCTGGGCGC GAGGGTGACG TTTGTCACGG GCCCCGCAGA TGTGCCGCCT
CCGGCGGGTG TCGATGTGGT GCGGGTAGAG ACGGCGCGAG AGATGTTGTC GGCGGTTCAG
GCCGCTCATC CAGCCGATGC GGCTGTCTTC GCGGCTGCGG TGGCCGACTG GCGGGTTGAA
AACGCCTCCG GCTCAAAGAT GAAGAAAGAT GGATCCGGCA ACGCGCCAGC GCTGGAGTTC
ACGGAGAACC CGGACATCCT TGCGGGCGTG GCTCGGATGG AGGAGGGGCG GCCAAAGCTG
GTGGTGGGCT TTGCGGCTGA GACCGACAAT GTGGTTGAGA ATGCCACCGC CAAGCGCCTG
CGCAAGGGCT GCGACTGGAT CGTGGCCAAT GATGTCTCCT CGGAGACGGG CATTATGGGC
GGCGATGAGA ATGCGATTGT CTTGATTGAC GGGGACGGGG CGGAGAGCTG GCCCAGATTG
CCGAAGGCGG AGGTCGCCAA ACGGTTGGCG CGGCGCATCG CGGACGCGAT TGGTGCGGTT
TGA
 
Protein sequence
MLTGKRILLI IGGGIAAFKS LDLIRRLRDQ GALVVPVLTR SAEEFVTPLS VSALAAQKVY 
RDLFDLTDEA EMGHIELSRA ADLVVVAPAT ADLMAKMAAG LANDLASTLL MATDKRVLIA
PSMNVRMWEH PATRRNLAVL QGDGVLVVGP DEGNMACGEY GPGRMADVPE IIEAVGAALG
DGSMKDRHVI VTSGPTHEPI DPVRYIANRS SGAQGGAMAA ALRDLGARVT FVTGPADVPP
PAGVDVVRVE TAREMLSAVQ AAHPADAAVF AAAVADWRVE NASGSKMKKD GSGNAPALEF
TENPDILAGV ARMEEGRPKL VVGFAAETDN VVENATAKRL RKGCDWIVAN DVSSETGIMG
GDENAIVLID GDGAESWPRL PKAEVAKRLA RRIADAIGAV