| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0883 |
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| Symbol | |
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| ID | 3933327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 838700 |
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| End bp | 839650 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637903231 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_508825 |
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| Protein GI | 89053374 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0459819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCAA CCGCAATCTT CCGCAAATAT GAACTGCAGA ACTATATCGT CTACCTCGGC
TTTATCGTGA TCTTCCTGTT TTTCGCCGTA ACGCTTCACG ATGCGGGTTT TACGTCCAGC
CGGAACCTGA CCAACATTGT TCTGCAAACT GCGCCTGCAA CGATTATGGC TATTGGTCTG
GTGTTCGCGC TGTCGGCTGG CGAGATCGAT CTTTCCTTCG GTTCAGCCGT TGCGGTTTCT
GCGCTATCCG CTGCGGTCGT CATGCAAGTT CTCCCAATGC CGGTGGCCGT TCTGGCCGGG
CTCGGCGCTG GGCTGGCCGT GGGGGCTTTC AACGGCATCT TGGTCGCCTG GCTGCGGCTG
CCGTCATTCC TTGTGACGCT TGCAACACTG GGCCTGTTTG CTGGCGTGGC CCGCACGATG
ACAGATTTGC GCTCAATCTC GGTGACCAAC GATTTCTTCA CCGGGTTTTT CGGGTCTGGC
GATCTCCTCG GCATTCCATC ACTTGTCTGG TGGACGGCCA TCGGCGTCGC GATCGGCCAT
TTTGTCTACC GCCATACCCG GTTCGGGGCG CATGTTCTGG CGACGGGCGA CAATGCGCGC
GCCGCGCAGG TTTCGGGGAT CAAGGTTCCA CGGGTCCGTT TCATGGTGCT GACAATCTGT
GGTGGCTGTG CCGGACTGGC AGGACTGCTT TACGCAGGCC GCCTGCAATC TGCCACCTAC
ACCCTCGGAG AAAGCGATCT GATGATCGTG ATTGCCGCGG TCATCGTGGG GGGCACCGCG
TTGAATGGTG GCAAGGGCTC CATCATCGGC GCCCTGATCG GTTCGCTCCT GATGGGGATG
CTGAACAATG GGCTCATCCT GATGGGCTTG CAGGTGTCTG ACCAAATGAT CGTTCGCGGT
CTTATCATTC TCGTCGCGGT CGCCGCATCG CTGCGCGACA CCACACGTTA A
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| Protein sequence | MSPTAIFRKY ELQNYIVYLG FIVIFLFFAV TLHDAGFTSS RNLTNIVLQT APATIMAIGL
VFALSAGEID LSFGSAVAVS ALSAAVVMQV LPMPVAVLAG LGAGLAVGAF NGILVAWLRL
PSFLVTLATL GLFAGVARTM TDLRSISVTN DFFTGFFGSG DLLGIPSLVW WTAIGVAIGH
FVYRHTRFGA HVLATGDNAR AAQVSGIKVP RVRFMVLTIC GGCAGLAGLL YAGRLQSATY
TLGESDLMIV IAAVIVGGTA LNGGKGSIIG ALIGSLLMGM LNNGLILMGL QVSDQMIVRG
LIILVAVAAS LRDTTR
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