| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0882 |
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| Symbol | |
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| ID | 3933326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 837512 |
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| End bp | 838564 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637903230 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_508824 |
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| Protein GI | 89053373 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.338248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0272241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCC ATCAGAGCCT AGTGATCAGT GCGGCCGCAC TCGCCTTCTC TGCGACCGCG
GCCTTCGCAC AAACGACAGG ACCTCAGGGA GAGACCGCGA CACCTTCGTC AGAAGTGACT
GTGTCAGACG AACTTGCTGC CAGCCTGCAA GGCCAAGGCC TTACAGCCGC TTTGCTTTGG
CACGACCAGT CTGATTTCGT GAATGCTGTC ACAGCAGGCG CAACAGACGA GTTTGAGCGT
CTGGGGATCG AAGTGATAAT AACGACCTCT GCAGCCTTCG ACGCGGCAAC ACAGCGTAGC
GATATCGAAA CCGCCCTTGT GCGATCCCCC GACATCATCC TGTCACTGCC GCTTGACCCC
GTGACATCGG CTGCAGCATT TCAGGAGGCG CGCGAAGAAG AGGTCGCACT CGTCTTCCTT
TCGAACCTTC CCGAAGGCTT TGAACACCCT GCGGATTACG CTGCGATTGT AACCGATGAC
CTGTTCCAGA TGGGCAGACA GGCTGCGGAT GCTCTTGCTG CATCCATCGG CGAAGAAGGC
ACCGTTGGTT GGATTTTCCA TGATGCGAAC TACTATGTGA CCAACCAGCG CGACAACGCC
TTCAGAACCA CGATTGAAAC CGATTACCCG AACATCGAAA TCGTGGCTGA AGCTGGGATC
AGCGATCCTG CGCGTGCCGA AGAAATCGCC AATGCAATGT TGCTGCGCAA TCCCGACCTC
TCGGGCATCT ACGTCACATG GGCAGGTCCA GCGGAGGGTG TCCTTGCTGC TTTGCGCGCA
AACGGAAATA CGACAACAAG GCTTGTCACC CTTGATCTGA GCGAGCCGGT CGCTCTGGAC
ATGGTCAACG GTGGCAACGT CGTGGCACTT GTCGCGGATG AGGCCTACGA GCTGGGCCGC
GCGATGGCTG CCGCCGGCGC CCGGCAGTAT GCGGGCGAGG AAACACCCCC GTTTGTGGTC
GCACCCGCAA TCACTGTTAC AGCTGATAAC ATCGCAGAAG GTTGGATGCA GTCTCTGCAT
GTCGATGCCC CTGCCAGCCT CACGGGTAAC TGA
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| Protein sequence | MKFHQSLVIS AAALAFSATA AFAQTTGPQG ETATPSSEVT VSDELAASLQ GQGLTAALLW
HDQSDFVNAV TAGATDEFER LGIEVIITTS AAFDAATQRS DIETALVRSP DIILSLPLDP
VTSAAAFQEA REEEVALVFL SNLPEGFEHP ADYAAIVTDD LFQMGRQAAD ALAASIGEEG
TVGWIFHDAN YYVTNQRDNA FRTTIETDYP NIEIVAEAGI SDPARAEEIA NAMLLRNPDL
SGIYVTWAGP AEGVLAALRA NGNTTTRLVT LDLSEPVALD MVNGGNVVAL VADEAYELGR
AMAAAGARQY AGEETPPFVV APAITVTADN IAEGWMQSLH VDAPASLTGN
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