Gene Jann_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0877 
Symbol 
ID3933321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp833411 
End bp833884 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content58% 
IMG OID637903225 
Producthypothetical protein 
Protein accessionYP_508819 
Protein GI89053368 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.485134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0237988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGA GCAAATGGAT CGAGACGGAT ACCGTTCATG ACCACATCAG CACCCTAGAG 
GGCGTTATCC CAAAGGACGC TTGGGGCGAG ACGTCGTATT TCTATAACCC CGGCCGCATC
TTCGAGCGTG GCACCTACTT TGCGACCGTC AAACAAAAGG ACGGCGACAA TGACAAGGCG
TCACACCTCG ACCGGGATGG CATCTGGCGG CTGAATATCG GTGTGACGAA GGGCACGTAT
TTTGAGCGCT TCGGCCCACC CCCGCCACGC CCCGGCAAAG GGGGCATTGT GGACGGCGAC
TGGAATTACA CCGCCCTCGA CACCCTGACG CCGCACCCTG TCTACGGTTG GATGTCTTGG
GTCGCCGTGC TGAACCCATC GAAGACAACC TGGCAACAGT GCATTGCGCT TATCGAGGAT
GCCCACGGCA GGGCAAAGAT CAATTTTGAG AAGCGAGTGG AGAAGCTGCC ATAA
 
Protein sequence
MSQSKWIETD TVHDHISTLE GVIPKDAWGE TSYFYNPGRI FERGTYFATV KQKDGDNDKA 
SHLDRDGIWR LNIGVTKGTY FERFGPPPPR PGKGGIVDGD WNYTALDTLT PHPVYGWMSW
VAVLNPSKTT WQQCIALIED AHGRAKINFE KRVEKLP