| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0876 |
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| Symbol | |
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| ID | 3933320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 832472 |
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| End bp | 833134 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637903224 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_508818 |
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| Protein GI | 89053367 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.398436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0490604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCAGG CAGCAGAAAA ACTCACGGCG GCGTCGGCGA TCTATGCAGC GATCAAGAGC
GACCTGCTGC GCGGTATCTT TCCAGCCGGC TCTCGCCTGT CCATCAAGGA TCTGGCAGAT
CGGTACGAAA CGTCCGTCAA TCCGGTTCGG GAGGCTCTTT CCCGGTTGTC GGCAGAGCGC
ATCGTTGATC AGCGCGAACA GCGGGGGTTC GCGGTGCCCG TTATCACCGA TGATGATCTG
CGAGAGTTGG TCAAAACGCG GTGCTGGATG GAGGATATCG CGCTGCGCGA AAGCATCGCG
AACACGGATG AGACCTATAC GCTGAACATT ATCACCGCAT ACCACCGCCT TGCGCACACG
CAATTTCTGG GGTCCGACGG GTTGCCAAAC ACGGATTGGG AAGATCGCCA CCGCATGTTT
CACCTTGCAT TGATCGCGAA TTGCGGGTCG TCGTGGTTAT TGTCGTTTTG CGATCATCTG
ATGTTTCAAG CAACCCGGGC GAGATACCTG GCAGTGACGA CCCAGCACCA CGACAACCGC
CTGCGCAACG ACGAGCACGA GGCGCTTATG AACGCAGCGA TTGAAGGCAA CGCTGACGAA
GCGTCGAAAT TGATCGACGA GCATTACCGC AAGACGCTAA GTCTGGTTAC GCGCAGCTAC
TAG
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| Protein sequence | MAQAAEKLTA ASAIYAAIKS DLLRGIFPAG SRLSIKDLAD RYETSVNPVR EALSRLSAER
IVDQREQRGF AVPVITDDDL RELVKTRCWM EDIALRESIA NTDETYTLNI ITAYHRLAHT
QFLGSDGLPN TDWEDRHRMF HLALIANCGS SWLLSFCDHL MFQATRARYL AVTTQHHDNR
LRNDEHEALM NAAIEGNADE ASKLIDEHYR KTLSLVTRSY
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