Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0866 |
Symbol | |
ID | 3933310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 821253 |
End bp | 822893 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637903214 |
Product | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_508808 |
Protein GI | 89053357 |
COG category | [C] Energy production and conversion [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.100369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAAC CGCGCATCGT GATCCTGGGC GGCGGCTTCG GCGGTCTCTA CACGGCCCGG GCCCTTCACC GCACCTTCCG CGACACCGCC GAGATCGAGG TGATCACGGC CGAGAACTAC TTCGTCTTCC AGCCTCTGCT GCCCGAGGTC GGCGCAGGGT CTGTCACGCC CATTCACGCC ACGTCCCCCT ACCGGTTCCT GTTGAAGGGC GTGGGCATCC GCAAGGCGAT GATCGACAGC GTCGATTTCG CCGCCAAGCG TGTCACCGTG TTCCAAGGCG TCCAGCGCCG CCCGACCGAG GTGCCCTACG ACCACCTCGT CGTGGCCCTT GGGCAGACCG TCGATCTGTC CCGCACCCCG GGACTTGAAG CCCACGCCCT GACGATGAAA ACGCTGGAAG ACGCCCGCCG CCTCCGCGCC CATGTGATCG AACGGCTGGA GCATGCCGAC ATCACCAACC TGCCGGAGGT CAAGCGCGGT GCCCTGACCT TCACCGTCAT CGGCGGGGGC TTTTCGGGGA TCGAGACCGT GGGGGAGATG GCGGAATTGA TCGACCGCTC CCTGAAATAT TATCCCAACG TCTCCCGCGA TGAGGTGCGT ATCATCGTGC TGGAATTCGC CGACAAGGTG CTGGCCGAAA TGCCCGAAAA GCTGCGCGCC TATGCCCAGG CGCAGCTTGA AAAGCGCGGG GTGGAAGTTT GTCTGAACAC CGGCATCGCC TCGGCCACCG GCACTCAGAT CACCACCACC GACGGCGATG TGATCGATAC CCGCACCGTA GTGGCCACCA TCGGCAACGC GCCTGCGCCG GTCGTCAAGC GTATGGACCT GCCCCTGACC CAGGGCCGCA TCGCGGTCGA ACGCGACCTC TCGGTGCCTG GGCGAGACGG CGTCTGGTCC CTTGGCGACT GTGCCCTGAT CCCGATGGTG GAGGACGCGA ATGCGCGCGA AGACTACGCG CCGCCCACCG CCCAATTTGC GGTGCGAGAG GCCAAGCAAC TGGCCGCAAA CATCAAACGC GCGGTCGATG GCACCGCGCT GAAACCCTTT GAATACACCT CCAAAGGCTC CATGGCGTCC CTTGGCGCGC GGCGCGGGAT CGCAGATGTC ATGGGCATCC GGCTGACCGG GTTTCTCGCC TGGGTCCTGT GGCGCGCGTA TTATGTGGCC TTTCTTCCCG GCTTTCCGGC GAAGGTCTGG GTGCTGAGCC ATTGGGTGCT GGATTGGGTG ACGCCGCGCA GTCTGGTGAA CCTGTCATCC CCCAAGACCG ACGCCTCGCG CCATATCCGC TATGCCAAAG GCGACCGGAT CTATGAGACG GGCAACCGCG CCGACACGTT CTTCACGATC ATTGAGGGCG CGGTCGAGAT CACCAACGCC AAAGGCCACG ACGGCCAGCC CACCACGCGG CGCATTGAGC CCGGCGGACA TTTCGGCGAA CGGCTGATCC TGGGGGCGAC CCGCCGCGTG GCAACGGCCC GCGCGCTGGA GGATACCGTT GTGCTGGCCA TGGGTCGGGA CGAATTCCTG AAGCTGACCC GGGCGTTACC GGCGCTGCGC GATTATTTTG AGGCGCATCT GGCAGAGAAG GGCCTCGATT GGGCACCTGA GCCGGACGAG CGGCGCGACG CTGCGGAATA G
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Protein sequence | MGKPRIVILG GGFGGLYTAR ALHRTFRDTA EIEVITAENY FVFQPLLPEV GAGSVTPIHA TSPYRFLLKG VGIRKAMIDS VDFAAKRVTV FQGVQRRPTE VPYDHLVVAL GQTVDLSRTP GLEAHALTMK TLEDARRLRA HVIERLEHAD ITNLPEVKRG ALTFTVIGGG FSGIETVGEM AELIDRSLKY YPNVSRDEVR IIVLEFADKV LAEMPEKLRA YAQAQLEKRG VEVCLNTGIA SATGTQITTT DGDVIDTRTV VATIGNAPAP VVKRMDLPLT QGRIAVERDL SVPGRDGVWS LGDCALIPMV EDANAREDYA PPTAQFAVRE AKQLAANIKR AVDGTALKPF EYTSKGSMAS LGARRGIADV MGIRLTGFLA WVLWRAYYVA FLPGFPAKVW VLSHWVLDWV TPRSLVNLSS PKTDASRHIR YAKGDRIYET GNRADTFFTI IEGAVEITNA KGHDGQPTTR RIEPGGHFGE RLILGATRRV ATARALEDTV VLAMGRDEFL KLTRALPALR DYFEAHLAEK GLDWAPEPDE RRDAAE
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