| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0861 |
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| Symbol | |
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| ID | 3933305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 817923 |
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| End bp | 818915 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903209 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_508803 |
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| Protein GI | 89053352 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0435568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGA TGAAAACCCT GCTCGGCGCT TGCGCCACAC TCGCCATCAC CGCGACCGGT
GCCCTGGCCG ACCCTGCCGT GATCTTCGAC CTGGGCGGCA AGTTTGACCG CTCCTTCAAC
GAGAGTGCCT TCAACGGCGC AGAGCGGTGG TCCGAGGAGA CCGGCGGCGA ATACCGTGAG
ATTGAACTGC AAAACGACGC TCAGCGCGAG CAGGCCCTGC GCCGCCTGGC CGAAGCCGGT
TCCAACCCCG TCGTGATGGC AGGCTTTGCG TTCGGCTCTG TGCTGGATGT CGTGGCCCCT
GACTACCCCG ACACGTCCTT CGTGATCATC GACGCCGTGG TGGAACAACC CAACGTGCAA
TCGATCATCT TCTCCGAGCA TGAGGGCAGC TTCCTTGTGG GCATGATGGC AGGTCTCGCC
TCCGAGACGG GCACCGTTTC CTTCGTGGGC GGCATGGACA TCCCGCTGAT CTCTCGCTTC
GCCTGCGGCT ATGCCCAGGG TGCCGTTGCG GCCAACCCCG ATATCACCGT CATCGCCAAC
ATGACCGGCA CCACGCCAGC TGCCTGGAAC GACCCCGTGC GCGGTGGTGA ACTGACCCGT
GGCCAGATCG GCCAGGGATC GGATGTGGTC TTTGCGGCAG CGGGCGGCAC CGGCCTCGGT
GTTCTGCAAA CCGCTGCGGA CGAGGGGATC CTCTCCATCG GTGTGGACGC CAACCAGAAC
TACCTGCACG AAGGCCAGGT CCTGACCTCG ATGCTCAAGC GCGTGGATGT CGCCGTCTAC
AACGCGTTCT CAGCGGACGC GATTGAGCCC GGTATCGTGG TTCTCGGCCT CGCCGAAGAC
GGTGTCGGCT ACGCGATGGA CGAGTTCAAC GCAGAGCTTG TCACCGAAGA CATGATCGCC
GCCGTGGATG CCGCGCGTGA ACAGATCATC GCGGGCGAGA TTGCCGTGCA CAACTTCACC
GAAGACGGCA CTTGCCCCGT CGAGATGCAG TAA
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| Protein sequence | MTMMKTLLGA CATLAITATG ALADPAVIFD LGGKFDRSFN ESAFNGAERW SEETGGEYRE
IELQNDAQRE QALRRLAEAG SNPVVMAGFA FGSVLDVVAP DYPDTSFVII DAVVEQPNVQ
SIIFSEHEGS FLVGMMAGLA SETGTVSFVG GMDIPLISRF ACGYAQGAVA ANPDITVIAN
MTGTTPAAWN DPVRGGELTR GQIGQGSDVV FAAAGGTGLG VLQTAADEGI LSIGVDANQN
YLHEGQVLTS MLKRVDVAVY NAFSADAIEP GIVVLGLAED GVGYAMDEFN AELVTEDMIA
AVDAAREQII AGEIAVHNFT EDGTCPVEMQ
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