| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0856 |
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| Symbol | |
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| ID | 3933300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 812931 |
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| End bp | 813908 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903204 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_508798 |
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| Protein GI | 89053347 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.115624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0464439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTCA TGACCATCCT GCAATTGCTC GACTCAACGG TGCGCCTCGC CACGCCGCTG
CTGCTCGCCT GCCTCGCGGG TTTGTTTTCC GAGCGCGCGG GGATCTTCGA CATCGGACTT
GAGGGGAAAA TGCTCGCCGC CGCCTTCTTC TCCGCGGCCA TCGCGTTCAC ATCCGGCAAT
GTCTGGGTTG GCCTCGGCGC GGGTGTGTTG GCCTCCGTCG TCCTGTCGCT CCTGCACGGC
CTGGCGTCCA TCACCTTCCG GGGCAACCAA CTGATCTCGG GTGTGGCCAT CAACTTCCTC
GCGGCAGGCC TGACCGTGGT GATTGCCCAG ACCTGGTTCT CCCAGGGCGG GCGCACGCCG
CCGCTGACAG GTGACGCCCG CTTCAATGAG ATCGTTCTGC CCGGCGCCGC CTCGCGCATC
CGCGACATCG CGCAGCAAAG CCCCCCCATG CAGATCTACT CCGAGCTGAT TTCCGGCCAC
TCGATCCTGG TCTATATCTC GATCCTGATC GTGCCCCTCA GCTGGTGGGT CCTCTATCGC
ACCCGCTTCG GTTTGCGTTT GCGCGCGGTG GGTGAGAACC CCGGCGCGGT GGATACGGCG
GGGATCTCCG TGGTGGCATT GCGGTTTGCG GCCGTGATCA TCTGCGGCGT CCTGTGCGGG
CTGGCGGGCG CATATCTTGC GACAGGCCTG TCGGCGGGTT TCGTGAAGGA TATGAGCGCG
GGTCGCGGGT TCATCGCACT GGCGGCACTG ATCTTCGCCA AATGGCGGCC GTGGTACGCG
CTTTATGCCT GCCTGCTTTT TGGCCTGCTC GACGCTGTCG GCAACCGCTT CCAGAATATC
GAGATCTTCG CGATCACGGT GCCGGTCCAG TTCATGCAGG CCCTGCCCTA TATCCTGACC
GTGGTGATCC TGGCGGGCTT CGTCGGCCGC GCCATCCCGC CCCGCGCGGG GGGCGAGCCT
TACGTAAAAG AGCGCTGA
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| Protein sequence | MDFMTILQLL DSTVRLATPL LLACLAGLFS ERAGIFDIGL EGKMLAAAFF SAAIAFTSGN
VWVGLGAGVL ASVVLSLLHG LASITFRGNQ LISGVAINFL AAGLTVVIAQ TWFSQGGRTP
PLTGDARFNE IVLPGAASRI RDIAQQSPPM QIYSELISGH SILVYISILI VPLSWWVLYR
TRFGLRLRAV GENPGAVDTA GISVVALRFA AVIICGVLCG LAGAYLATGL SAGFVKDMSA
GRGFIALAAL IFAKWRPWYA LYACLLFGLL DAVGNRFQNI EIFAITVPVQ FMQALPYILT
VVILAGFVGR AIPPRAGGEP YVKER
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