| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0850 |
|---|
| Symbol | |
|---|
| ID | 3933294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 805051 |
|---|
| End bp | 806229 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637903198 |
|---|
| Product | peptidase M24 |
|---|
| Protein accession | YP_508792 |
|---|
| Protein GI | 89053341 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | [TIGR02993] ectoine utilization protein EutD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.877602 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0862108 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGACC GCATTCCAAA CTTCGATCGT TCCGAATACG ACACCCGTCT GGCCAAGATC
CGCACGGCCA TGGGGGCCGC CGACCTGGAC TGGCTGATCG TGACCGACCC GTCGAATATG
GCCTGGCTCA CGGGCTACGA CGGCTGGTCG TTCTACGTCC ATCAGGCGGT GGTTGTCGGC
CCCACGGGCA TGCCCCTCTG GTGGGGTCGG GCGATGGACA GCCTCGGCGC GCTGCGCACT
GTCTACATGC CCGATGATCA CGTCGTGGGT TACGATGATA CCTACGTGCA AAACCCCGCA
AAACATCCCC ATGAAACGCT AGCCGCGCTG CTGACAACCC GCGGGGCCGC CAAAGCCCGC
ATCGGGGTGG AACTGGACAA TTACTATTAT TCCGCTGCCG CCCACGCGGC CCTTCTGGCG
CATCTGCCCA ACGCGCGCCT CGTGGATGCC ACCGGCCTGG TGAACTGGCA ACGGGCCGTG
AAATCCCCGG CGGAAGTCGC CCGCATGCGC AAAGCCGCTG GTATTGTGGA GGCGATGCAC
CGCCGCATCC TGGAGGTCGC CGAACCCGGC CTGCCCAAGC ACCACCTGGT GGCCGAGATC
CTCGCGACGT CCGTGAAGGG CACAGACGAC GCCTGGGGCG ATTATCCCGC CATCGTGCCG
CTCACCCCCT CGGGCATGGA CGCCACCGCA CCGCATCTGA CTTGGGATGA CAGGCCGATG
CAAACCGGGG AGGCGACGTT TTTTGAGATT GCGGGCGTCT ACCGCCGCTA CCATTGCCCG
CAATCCCGCA CGCTCTTCCT AGGCTCCATG CCCGATGCCT ACAGGCGCGC CGAACAGGCG
GTGCTGGAGG CCAGCGCCAA GGCCCTGTCC ACCGCGCGGC CCGGCACTAC CTGCGGTGAG
GTCGCCGACG CGTTCAACAC CACCCTCAAC CGTCTTGGGT ACGAGAAGGA CAGCCGCTGC
GGCTATGCCA TCGGCCTCAG CTATCCGCCC GATTGGGGTG AGCGGACCAT GTCCTTCCGC
GCGGACGACA CCACCGTTCT GAAACCCGGC ATGACCTTTC ACTTCATGCC CGCCCTCTGG
CTGGAGGACG GCGGGATCGA GATCACCGAA CCGATCCTGA TCACTGAAAC AGGCGCCGAG
TGCCTGTCGT CCCTGCCCCG CGAAGTCTTC GTCAAATGA
|
|---|
| Protein sequence | MPDRIPNFDR SEYDTRLAKI RTAMGAADLD WLIVTDPSNM AWLTGYDGWS FYVHQAVVVG
PTGMPLWWGR AMDSLGALRT VYMPDDHVVG YDDTYVQNPA KHPHETLAAL LTTRGAAKAR
IGVELDNYYY SAAAHAALLA HLPNARLVDA TGLVNWQRAV KSPAEVARMR KAAGIVEAMH
RRILEVAEPG LPKHHLVAEI LATSVKGTDD AWGDYPAIVP LTPSGMDATA PHLTWDDRPM
QTGEATFFEI AGVYRRYHCP QSRTLFLGSM PDAYRRAEQA VLEASAKALS TARPGTTCGE
VADAFNTTLN RLGYEKDSRC GYAIGLSYPP DWGERTMSFR ADDTTVLKPG MTFHFMPALW
LEDGGIEITE PILITETGAE CLSSLPREVF VK
|
|---|
| |