| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0843 |
|---|
| Symbol | |
|---|
| ID | 3933287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 798938 |
|---|
| End bp | 799861 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637903191 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_508785 |
|---|
| Protein GI | 89053334 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.226682 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATCT ACCTACCCAT TGCCGAGGTG AGCGTGAATG CGTTCCTTCT GCTGGGATTG
GGCGGGCTTG TGGGCGTTCT GTCGGGCATG TTCGGCGTCG GTGGCGGCTT TCTGATGACG
CCGCTGTTGT TCTTCATCGG CATCCCGCCG GCGGTGGCCG TGGCGACGGA GGCCAATCAG
ATCGTGGCCT CGTCCTTCTC GGGCGTGTTG GCACATTTGA AGAGAAAGAC TGTCGATCTG
AAGATGGGCC TTGTGCTGCT GATCGGCGGT CTCATCGGGG CGGCCATCGG TGTGCAAGTC
TTTGCAGCGC TGACGGCCAT TGGCCAGGTC GACCTGCTGG TAAGGCTTTG CTACGTTGTT
TTCCTGGGGA TTATCGGCGG GTTGATGTTC ATTGAGAGCC TCAACGCGAT CCGCAAATCG
CGCAGGGCAG GCGGTGTGGT CCCGCCCAAG CGCCGCCATC GCGGCTGGAT CCACGCGCTG
CCCTTCAAGA TGCGGTTTCG GACCTCGGGC CTTTATATCT CGGTGATCCC GCCCCTGATC
GTGGGCCTGT TCGTGGGCGT TCTGGCCGCC ATCATGGGGG TGGGCGGCGG TTTCATCATG
GTGCCCGCGA TGATCTATCT TCTGGGGATG CCCACGAAGG TCGTGGTCGG CACGTCGCTG
TTCCAGATCA TTTTCGTGAC CGGCTTTGCC ACGCTGATGC ATGCCACGAC GAACTATACC
GTCGACATGG TTCTGGCCGT TCTGCTGTTG GTGGGCGGGG TGATTGGCGC GCAGATTGGG
GCGCGGATCG GCACGAAGAT GAAGGCCGAG CAATTGCGGA TCCTGCTGGC GATCATGGTG
CTGGCTGTCT GTGGCAAGCT GGCGTTTGAT CTGCTGGTGA TGCCGTCGGA GCTGTATTCC
ATTGGGACGG GGGCGGGGCA TTGA
|
|---|
| Protein sequence | MQIYLPIAEV SVNAFLLLGL GGLVGVLSGM FGVGGGFLMT PLLFFIGIPP AVAVATEANQ
IVASSFSGVL AHLKRKTVDL KMGLVLLIGG LIGAAIGVQV FAALTAIGQV DLLVRLCYVV
FLGIIGGLMF IESLNAIRKS RRAGGVVPPK RRHRGWIHAL PFKMRFRTSG LYISVIPPLI
VGLFVGVLAA IMGVGGGFIM VPAMIYLLGM PTKVVVGTSL FQIIFVTGFA TLMHATTNYT
VDMVLAVLLL VGGVIGAQIG ARIGTKMKAE QLRILLAIMV LAVCGKLAFD LLVMPSELYS
IGTGAGH
|
|---|
| |