| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0831 |
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| Symbol | sucA |
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| ID | 3933274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 785114 |
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| End bp | 788071 |
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| Gene Length | 2958 bp |
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| Protein Length | 985 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637903178 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_508773 |
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| Protein GI | 89053322 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.270147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACC AATCTCCCAA CGATACCTTC CATGCCTCCA GCTTCATGCA GGGGCACAAT
GCGGAATATC TGGAACAGCT TTACGCGCAA TATGCCAAGG ACCCGGCGGC GGTGGATGCC
GCCTGGGCGG ATTTCTTTGC GCAATTGGGC GATGCCGAGG ATGCGATGGC CCCGGCCGAA
GGGCCATCCT GGGCGCGCAC TGATTGGCCG CCAATGCCGG GCGATGATCT GACGGCGGCC
CTGACCGGGG ACTATCCGCT ACCCGCAGAA GCCAAGGAGG CCGGCAAAAA GATCAAGGCC
AAGGCCGAAG AGACGGGCGT TGAGCTGAGC GATGATCAGA TCCAACGCGC CGTCCTCGAC
AGTATCCGCG CGCTCATGAT CATTCGCGCC TACCGCATCC GGGGCCATCT GGTCGCCGAT
CTGGACCCCC TGGGCATGCG CGACCAGACC CCGCACCCGG AACTGGACCC GGCGTCCTAC
GGGTTTGAAG ACGCGGACAT GGATCGCCCG ATCTTCATCG ACAACGTGCT TGGGCTGGAA
ATGGCCACCA TGCGCCAGAT CGTGGAGATC GTGCGGCGGA CCTATTGCGG CACCTTCGCG
CTGCAATACA TGCACATCTC CAACCCCGTG GAAGCGTCTT GGCTGAAGGA ACGGATCGAG
GGTTACGGCA AGGAGATTGC ATTCACCAAG AACGGGCGCA AAGCGATCCT GAACAAGATG
GTGGAGGCGG AAGGGTTCGA AAAGTTCCTC CACGTCAAGT ACATGGGCAC AAAGCGGTTT
GGTCTGGACG GCGGCGAAAG CCTGATCCCC GCGATGGAGC AGATCATCAA GCGGGGCGGC
GCGTTGGGGG TGGAAGAGAT CATCATCGGC ATGCCCCACC GGGGGCGTCT GTCGGTTCTG
GCCAATGTCA TGCAAAAGCC CTATCGCGCG ATTTTCAACG AATTTCAGGG CGGGTCGTTC
AAGCCGGAGG ACGTCGATGG CTCGGGCGAT GTGAAGTACC ATTTGGGCGC CTCATCCGAC
CGGGAGTTTG ACGGCAACAC CGTTCACCTG TCGCTGACGG CCAACCCGTC GCACCTGGAG
GCCGTGAACC CGGTTGTCCT CGGCAAGGTC CGTGCCAAGC AGGATCAGAA GAAAGACAAG
GAGCGCACGA AGGTTATGGG CGTGTTGCTG CACGGTGACG CGGCCTTTGC CGGTCAGGGC
GTGGTGGCAG AAGGCTTTGG CCTGTCCGGC CTGCGCGGGC ACCGGACCGG GGGCACGATC
CACATCGTCG TGAACAACCA GATCGGATTC ACGACTGCGC CGCATTTCAG CCGCTCCAGC
CCTTATCCGA CGGACATCGC GCTGATGGTT GAAGCGCCAA TATTCCACGT GAACGGAGAT
GATCCAGAGG CTGTCGTCCA TGCCGCCCGC GTGGCGACGG AGTTTCGGCA GAAATTCCAC
AAGGACGTGG TCCTCGACAT TTTCTGTTAC CGCCGGTTTG GCCATAACGA GGGTGATGAG
CCCATGTTCA CCAACCCGAT CATGTATAAG AAGATCAAGA CGCAGAAGAC GACGCTGGCG
ATTTACACCG AACGCCTTGT CAAAGACGGG CTGATCCCCG AGGGCGAGAT CGAGGATATG
AAAGCCTCAT TCCAGGCCTA CCTGAGTGAG GAGTTCGAGG CCGGGAAAGA CTACAAGCCC
AACAAGGCCG ATTGGCTCGA CGGGCGGTGG TCGCATCTGG ATCGCAAGGA TCAGGATGAC
TACCAGCGCG GGCAAACCGC GATCGCGCCG GAGACGTTTG ACGAGATCGG CAAAGCCCTG
TCGACCGCAC CAGAGGGTGT CAGCCTGCAC AAGACGGTCG GGCGATTGCT GGACACGAAA
GCCAAGATGT TCGAGACGGG CAAAGGGTTT GACTGGGCCA CTGGTGAGGC GCTGGCGTTT
GGGTCTTTGC TGACCGAAGG CTATCCGGTG CGGCTCTCGG GCCAGGACAG CACCCGCGGG
ACATTCTCGC AGCGGCATTC CGGCCTTGTC GATCAGGAAA CGGAAGAGCG GTACTACCCG
CTGAACCATG TGCGCGAGGG GCAGGCACAT TACGAGGTGA TCGACTCGAT GCTCTCGGAA
TACGCCGTGT TGGGGTTTGA GTACGGCTAC ACGCTGGCCG AGCCCAACGC GCTGACGCTT
TGGGAAGCGC AGTTCGGTGA TTTCGCCAAT GGGGCACAGA TCATGTTTGA TCAGTTCATC
TCATCGGGTG AAAGCAAATG GCTGCGGATG TCCGGCTTGG TGATGCTGTT GCCCCACGGG
TATGAGGGGC AGGGGCCGGA GCATTCCAGC GCGCGATTGG AGCGGTTCTT GCAGATGTGC
GGCGGCGACA ACTGGATCGT CGCGAACTGC ACGACACCAG CGAACTACTT CCACATTCTG
CGCCGTCAGA TCCACCGGGA TTTCCGCAAG CCGCTGGTTT TGATGACGCC GAAGTCGCTG
CTGCGTCACA AGCTGGCGGT GTCGGAAACG GAGGATTTCA CCACCGGGTC CAGCTTCCAT
CGCTGCCTTT GGGATGATGC CCAAAAGGGG AACTCGGACA CGGAACTGGT GGCCGACGAC
AAGATCAAGC AGGTCGTCAT CTGCTCGGGC AAAGTCTATT TCGACCTGCT GGAAGAGCGT
GACGAACGCG GCATTGATGA TGTCTACCTG CTGCGGCTGG AACAATTCTA CCCATTCCCG
GCGCTGTCGC TGACCAAGGA ATTGGAGCGC TTCAAGCAGG CCAAGATCGT CTGGTGCCAG
GAAGAGCCCA AGAACCAGGG CGCATGGTCG TTTATCGAGC CCAATCTGGA GTGGGTTTTG
ACCCGCATCG GTGCTGACAC CCAACGCCCG CGCTACGCGG GACGCACAGC CTCGGCCTCG
CCCGCGACGG GCCTGGCCTC CGCCCACAAA TCCCAACAAG CCGCACTCGT TGACAGTGCA
CTGACCATCG AAGGGTAA
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| Protein sequence | MNDQSPNDTF HASSFMQGHN AEYLEQLYAQ YAKDPAAVDA AWADFFAQLG DAEDAMAPAE
GPSWARTDWP PMPGDDLTAA LTGDYPLPAE AKEAGKKIKA KAEETGVELS DDQIQRAVLD
SIRALMIIRA YRIRGHLVAD LDPLGMRDQT PHPELDPASY GFEDADMDRP IFIDNVLGLE
MATMRQIVEI VRRTYCGTFA LQYMHISNPV EASWLKERIE GYGKEIAFTK NGRKAILNKM
VEAEGFEKFL HVKYMGTKRF GLDGGESLIP AMEQIIKRGG ALGVEEIIIG MPHRGRLSVL
ANVMQKPYRA IFNEFQGGSF KPEDVDGSGD VKYHLGASSD REFDGNTVHL SLTANPSHLE
AVNPVVLGKV RAKQDQKKDK ERTKVMGVLL HGDAAFAGQG VVAEGFGLSG LRGHRTGGTI
HIVVNNQIGF TTAPHFSRSS PYPTDIALMV EAPIFHVNGD DPEAVVHAAR VATEFRQKFH
KDVVLDIFCY RRFGHNEGDE PMFTNPIMYK KIKTQKTTLA IYTERLVKDG LIPEGEIEDM
KASFQAYLSE EFEAGKDYKP NKADWLDGRW SHLDRKDQDD YQRGQTAIAP ETFDEIGKAL
STAPEGVSLH KTVGRLLDTK AKMFETGKGF DWATGEALAF GSLLTEGYPV RLSGQDSTRG
TFSQRHSGLV DQETEERYYP LNHVREGQAH YEVIDSMLSE YAVLGFEYGY TLAEPNALTL
WEAQFGDFAN GAQIMFDQFI SSGESKWLRM SGLVMLLPHG YEGQGPEHSS ARLERFLQMC
GGDNWIVANC TTPANYFHIL RRQIHRDFRK PLVLMTPKSL LRHKLAVSET EDFTTGSSFH
RCLWDDAQKG NSDTELVADD KIKQVVICSG KVYFDLLEER DERGIDDVYL LRLEQFYPFP
ALSLTKELER FKQAKIVWCQ EEPKNQGAWS FIEPNLEWVL TRIGADTQRP RYAGRTASAS
PATGLASAHK SQQAALVDSA LTIEG
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