| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0824 |
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| Symbol | |
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| ID | 3933267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 780574 |
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| End bp | 781404 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903171 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_508766 |
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| Protein GI | 89053315 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3306] Glycosyltransferase involved in LPS biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.635331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACGC GCCCGTCCAT GGCCGGTCCC CAAGTCATTC CGGCCTTCGT CATCAACCTC
AAACGGGCCG CTGCCCGGCA AGTGATCATG CGGGAGACCT GTTCTGCGGC GGGTGTGCAG
GTGCATTTCG TCGACGCGGT GGATTCGCAA ACCGATGAAG GCCGCGCAGC CGTGGATCGC
CTGCCGGATT TCGGCCCCTG GGGGGTGTTT CATGGCCATG ACCGGGCCTG CACGCTGAGC
CATTACAAAG CACTGGTGGC GTTTCTGGAA ACGCCTGCGA CCCACGGATT GATCCTGGAG
GATGACGTTT TCCTCGCCTC CGATCTGGGG GAGTGGATGG AGGATGCCCT CTGGTGGCCA
GCGAATGCCG ATGTGGTGAA GTTTGAGCGC TGGCGGGACG ACAAGCTGCT GGTGGCGTTG
GAGAAGCGCA CAACATCGGT CGGGGACCGT ATGCTGCGGG TTCTGCAATC TCGCCATTCC
GGCGGCGCGG GCTATGCCGT TACCCGTGCT GCGGCGGAAC GTATCCTGGC GGTCGCAAAG
CCGGACGTGC CGATTGACCA TCTGCTGTTC AATCCAAACG TGTCGCGTCT GGCCCGGGGT
CTGACGACCT ATCAGGTGAT GCCTGCCATG ATCGTTCAGG GAAATGAGCC GCCGCCCGAG
CCCGCTGCGC CGCGTCAGGA CCGGGGGCAG CTGCCTGAAA GCAAGCTGCG CAAGGATCTG
TTGCGCGGCT GGCAGGAGAT CAAGGTGATC CCACGTCTTT TGGCGCTGCT GCTGACCCGG
CGCATCTCCC TCGAAAAGGT CCATTGGGCC GATGGAGGGA GGGCGCGATG A
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| Protein sequence | METRPSMAGP QVIPAFVINL KRAAARQVIM RETCSAAGVQ VHFVDAVDSQ TDEGRAAVDR
LPDFGPWGVF HGHDRACTLS HYKALVAFLE TPATHGLILE DDVFLASDLG EWMEDALWWP
ANADVVKFER WRDDKLLVAL EKRTTSVGDR MLRVLQSRHS GGAGYAVTRA AAERILAVAK
PDVPIDHLLF NPNVSRLARG LTTYQVMPAM IVQGNEPPPE PAAPRQDRGQ LPESKLRKDL
LRGWQEIKVI PRLLALLLTR RISLEKVHWA DGGRAR
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