Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0818 |
Symbol | |
ID | 3933261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 775544 |
End bp | 776506 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637903165 |
Product | malate dehydrogenase |
Protein accession | YP_508760 |
Protein GI | 89053309 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.68973 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGAC CCAAGATTGC GCTGATTGGC GCGGGACAGA TCGGTGGCAC CCTTGCCCAC CTTGCGGCGT TGAAGGAATT GGGGGACGTG GTCCTCTTTG ACATCGCGGA AGGCGTGCCC CAGGGCAAAG CGCTAGACAT CGCGGAATCA GGCCCGTCCG AGAAATTTGA CGCCGACATG AGCGGCACCA ACGACTACGC CGACATCGCA GGCGCGGACG TTTGCATCGT CACCGCCGGG GTCGCCCGCA AGCCGGGTAT GAGCCGCGAT GACCTGCTGG GGATCAACCT CAAGGTGATG AAATCGGTCG GCGAAGGCAT CCGCGATAAC GCGCCGGATG CGTTTGTGAT CTGCATCACC AACCCGCTGG ACGCCATGGT TTGGGCGCTG CGCGAATTCT CTGGCCTGCC GCACCATAAG GTCTGCGGCA TGGCGGGTGT TCTGGATTCT GCGCGCTTCC GCCATTTCCT GGCAGATGAA TTCAACGTTT CCATGAAAGA CGTCACGGCC TTCGTCTTGG GCGGTCACGG TGACACGATG GTGCCGCTGA CCCGCTATTC CACCGTGGCC GGTATTCCGC TGCCGGATCT GATCGAGATG GGGTGGACCA CGCAGGAGAA GATGGATGCC ATCGTCCAGC GCACCCGGGA TGGCGGCGCT GAGATCGTGG GCCTGCTGAA GACCGGATCG GCCTTCTACG CCCCCGCGAC GTCCGCGATT GAGATGGCCG AAGCCTACCT CAAGGACCAG AAGCGCGTGC TGCCCTGTGC GGCCTATGTG GACGGTGCGC TTGGCCTCAA GGGCATGTAT GTGGGCGTGC CCACCGTGAT CGGCGCCGGT GGCGTTGAGC GTGTGGTCGA CATCAATATG ACCAAGGACG AGCAGGCGAT GTTCGATAAT TCCGTCGCTG CGGTGAACGG TCTGGTTGAG GCTTGCAAGG CCATCGACGA AACGCTGTCC TAA
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Protein sequence | MARPKIALIG AGQIGGTLAH LAALKELGDV VLFDIAEGVP QGKALDIAES GPSEKFDADM SGTNDYADIA GADVCIVTAG VARKPGMSRD DLLGINLKVM KSVGEGIRDN APDAFVICIT NPLDAMVWAL REFSGLPHHK VCGMAGVLDS ARFRHFLADE FNVSMKDVTA FVLGGHGDTM VPLTRYSTVA GIPLPDLIEM GWTTQEKMDA IVQRTRDGGA EIVGLLKTGS AFYAPATSAI EMAEAYLKDQ KRVLPCAAYV DGALGLKGMY VGVPTVIGAG GVERVVDINM TKDEQAMFDN SVAAVNGLVE ACKAIDETLS
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